Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20acaciae_20[genbank_20GCA_5F001600675.1_202016-03-01] 10 sequences; 11,065,882 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq2 192 9e-44 seq7 136 6e-27 >seq2 Length=1761743 Score = 192 bits (212), Expect = 9e-44 Identities = 561/857 (65%), Gaps = 26/857 (3%) Strand=Plus/Plus Query 17861 GCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATT 17920 ||||||| ||| || | |||| |||||||||| || || |||||||| |||| ||||| Sbjct 1444144 GCTTTTTGGTAGTCACTGACTCTTTTCTCGAAAAAGTTAGTCTTTCCCGCCAACGATATG 1444203 Query 17921 AAATTCATAAAATCAAATGGATTAGTG--GTTTTATAATATTTTTCTTGTATTAATTCGT 17978 | ||| ||||| |||||||| ||| ||| || || || || || || Sbjct 1444204 TTTTCCATGAAATCGAATGGATTTGTGACGTTGTA-AACCTTGTTGTTACCCAAAGCAAC 1444262 Query 17979 ATAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTA 18038 | | |||||| || || || || |||||||| || ||||||| | | |||||||| | Sbjct 1444263 A-AGTAATCTGTCGGCAACGAACTCGACATACTGACACATCAACTTGGCGTTCATACCCA 1444321 Query 18039 GTAGTCTGAAAGGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTTTA 18098 || | | || | ||||| | || || |||||||| || || | || | | Sbjct 1444322 ATAATGACACGGGCAAGGCATCGACAAAGAACTCTTTCTCGATTGTGACTGCTTCGGTGA 1444381 Query 18099 TTATGTTTATTACC----CTAGATTTTGGCAATTTATTAATTATGTGATTATAATATAAT 18154 | || ||| || || ||| | | | |||| || | | || | || Sbjct 1444382 TAATTTTTTCGACAATCTCTTGATCTGGTCTATTTTGCAAGTGAGAGA-------ACAAC 1444434 Query 18155 AAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTT 18214 || || ||||| || |||||||||||||||||||| | || || ||||| || || Sbjct 1444435 AAGCATGCAAAGTCGGTGTGTAAACCTTCATCTCTACAAATCAACTCGTTGGAGAAAGTC 1444494 Query 18215 AACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGA---AACTACTAGAA 18271 || || ||||| | ||||||||| |||| ||| || || || |||| | | ||| ||| Sbjct 1444495 AAACCTGGCATCAAACCTCTTTTCTTTAACCAGAAGATAGAAGCGAATGATCCACT-GAA 1444553 Query 18272 AAGAATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAA-ACTGTATTTATT 18330 | || |||||||| ||| |||||||| | |||||| ||| |||| | | | || Sbjct 1444554 A--AAGATACCCTCGACGGCGGCGAACGCAACTAATCTCTCACCAAACAAGGCACTTCCG 1444611 Query 18331 GCTCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTAT 18390 | | ||||| | ||||| || | | ||||| || || |||| || Sbjct 1444612 TCGTTG-ATCCACCTCAAAGCCCAGTCAGCCTTCTTCTTGATACATGGAATGTTCTCGAT 1444670 Query 18391 AGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGA 18450 || || |||||| ||| ||||| || || || || || |||||||| | |||||| Sbjct 1444671 GGCGTTGAACAAAAAGTCTGCTTCTTGGGGGTCCTTGATGTAGGTGTCGATAAGCAAAGA 1444730 Query 18451 ATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTC 18510 || | ||||| || ||| | ||||| || || || | || || | | || || Sbjct 1444731 GTAGGTCTCAGAGTGGATGTTCTCCATCATGATTTGGAACCCGTAGAAACACTTGGCTTC 1444790 Query 18511 GGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGC 18570 ||| ||| | ||| | |||| |||| ||||| ||||| || || ||||| || | Sbjct 1444791 TGGAATTTGCACCTCAGCAGAAAAATTTTCAACCAAGTTCTCGTTGACAATACCATCCGA 1444850 Query 18571 AGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGA---GATT 18627 | || || || ||||| | | |||||| | || || || || || | | Sbjct 1444851 TGCAGCAAAGAAAGCCAAGATTCTTGAAATGAAGTACTTCTCGTTGTCGTTCAATCTCTC 1444910 Query 18628 GTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTC 18687 ||||| || | |||||||| | ||||| || |||| ||||| ||||| | || Sbjct 1444911 CTTCCAGTCGTGGATATCTTTGCCCAAATCAATCTCCTCCGCAGTCCAGAAAGACGCCTC 1444970 Query 18688 GGCCTGTTTGTACATTT 18704 ||||| |||||||||| Sbjct 1444971 GGCCTTCTTGTACATTT 1444987 Score = 141 bits (156), Expect = 1e-28 Identities = 173/234 (74%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || |||||||| || |||| || || ||||| || ||||| || |||||||||||| | Sbjct 928151 AAGATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACTATCACTTTAGAAGTCGAATCT 928210 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 ||||| | |||| || || || || || ||||| || ||||| || |||||||| Sbjct 928211 TCTGACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCAGAC 928270 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 |||||||||||||| | ||| |||||||| | || ||| |||||| || || || || Sbjct 928271 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTAC 928330 Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 | | ||||||| || | || | || || ||||| ||||| ||||| |||| Sbjct 928331 A--ACATCCAAAAGGAATCTACCTTGCACTTGGTGTTGAGATTGAGAGGTGGTG 928382 >seq7 Length=997883 Score = 136 bits (150), Expect = 6e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || |||||||| || ||||||||||||| || || || || || || |||||||| | Sbjct 388982 AATATGCAAATTTTCGTTAAAACATTGACCGGTAAGACCATCACCTTGGAAGTCGAGTCT 388923 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || || | || ||||| || ||| || ||||| || || || || |||||||| Sbjct 388922 TCCGACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAGGAGGGAATTCCTCCAGAC 388863 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 |||||||||||||| | ||| |||||||| | |||||| ||||||||| || || || Sbjct 388862 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCCGACTAC 388803 Query 156000 AATATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || || ||| || | || | || || || |||||||| ||||| ||| Sbjct 388802 AACAT-TCAAAAGGAATCTACTTTACACTTGGTTTTAAGATTGAGAGGTGGT 388752 Score = 131 bits (144), Expect = 2e-25 Identities = 168/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | ||||||||||| || || || ||||| |||||||| ||| || Sbjct 388751 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATTACTTTAGAAGTTGAATCATCA 388692 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || || || || ||||| || || || || || || || ||| Sbjct 388691 GATACAATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAGGGAATCCCACCTGATCAA 388632 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||| | ||| |||||||| | |||||| ||||||||| || || || | Sbjct 388631 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCCGACTACA-- 388574 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 | ||||||| || | || | ||||| ||||| ||||| ||||| ||| Sbjct 388573 ACATCCAAAAGGAATCTACTTTACATTTGGTGTTGAGATTGAGAGGTGGT 388524 Score = 113 bits (124), Expect = 7e-20 Identities = 139/189 (74%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| |||| || ||||| || || || ||||| |||||||| || || Sbjct 388523 ATGCAAATCTTTGTTAAGACTTTGACCGGTAAGACCATTACCTTAGAAGTTGAGTCCTCC 388464 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || || || || |||||||| ||||| || || || || ||| Sbjct 388463 GACACTATCGACAATGTCAAGTCCAAGATTCAAGATAAGGAAGGAATCCCACCTGATCAA 388404 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||| | ||| |||||||| | |||||| ||||||||| || || || | Sbjct 388403 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCCGACTACA-- 388346 Query 156003 ATATCCAAA 156011 | ||||||| Sbjct 388345 ACATCCAAA 388337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731871908516000