Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Millerozyma_20acaciae_20[genbank_20GCA_5F001600675.1_202016-03-01]
10 sequences; 11,065,882 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq7 167 4e-36
seq2 138 2e-27
>seq7
Length=997883
Score = 167 bits (184), Expect = 4e-36
Identities = 175/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || ||||||||||||| || || || || || ||
Sbjct 388522 ATACCACCTCTCAATCTCAACACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCG 388581
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| |||| || | || |||||||| ||||||||||| || ||||| ||||| ||||||
Sbjct 388582 GACAAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGT 388641
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||| || || ||||| || || || ||||| || |||||||| |||||
Sbjct 388642 GGGATTCCCTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATTGTATCTGATGATTCA 388701
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||||| ||||||||| ||||| || |||||||| | ||| || |||||
Sbjct 388702 ACTTCTAAAGTAATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 388751
Score = 150 bits (166), Expect = 3e-31
Identities = 173/233 (74%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || ||| || || |||||||||| || || ||| || || ||
Sbjct 388750 ATACCACCTCTCAATCTTAAAACCAAGTGTAAAGTAGATTCCTTTTGAATGTTGTAGTCG 388809
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| |||| || | || |||||||| ||||||||||| || ||||| |||||||| ||
Sbjct 388810 GACAAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGA 388869
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||| || || ||||| || ||| || || ||| || || || || || ||
Sbjct 388870 GGAATTCCCTCCTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGACTCG 388929
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| | || ||||| ||||| || |||||||||| ||| || ||||| ||
Sbjct 388930 ACTTCCAAGGTGATGGTCTTACCGGTCAATGTTTTAACGAAAATTTGCATATT 388982
Score = 125 bits (138), Expect = 1e-23
Identities = 137/182 (75%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
|| || || || || |||| || | || |||||||| ||||||||||| || |||||
Sbjct 388342 ATGTTGTAGTCGGACAAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTT 388401
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
||||| |||||||| |||||||| |||||||| || || || ||||| |||||
Sbjct 388402 TGTTGATCAGGTGGGATTCCTTCCTTATCTTGAATCTTGGACTTGACATTGTCGATAGTG 388461
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
|| || || || ||||||| |||||||| ||||| || || || |||| || || |||
Sbjct 388462 TCGGAGGACTCAACTTCTAAGGTAATGGTCTTACCGGTCAAAGTCTTAACAAAGATTTGC 388521
Query 172068 AT 172069
||
Sbjct 388522 AT 388523
>seq2
Length=1761743
Score = 138 bits (152), Expect = 2e-27
Identities = 174/239 (73%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || || || || || || |||| || || || ||
Sbjct 928389 TTCTTACCACCACCTCTCAATCTCAACACCAAGTGCAAGGTAGATTCCTTTTGGATGTTG 928330
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
|| || || || | || | || |||||||| ||||||||||| || ||||| ||||||
Sbjct 928329 TAGTCAGACAAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGG 928270
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|| || || |||||||| || ||||| || || || ||||| ||||| || ||
Sbjct 928269 TCTGGAGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAA 928210
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| ||||||| ||| || || ||||||||||| || |||| ||| || ||||| ||
Sbjct 928209 GATTCGACTTCTAAAGTGATAGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCATCTT 928151
Score = 113 bits (124), Expect = 8e-20
Identities = 307/462 (66%), Gaps = 11/462 (2%)
Strand=Plus/Plus
Query 38831 TTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAA 38890
||||||||| ||| ||| |||| ||||||||||| || ||||| | || |||||
Sbjct 1444146 TTTTTGGTAGTCACTGACTCTTTTCTCGAAAAAGTTAGTCTTTCCCGCCAACGATATGTT 1444205
Query 38891 ATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATATAA 38950
| ||| ||||| ||||||||| || || ||| || | | || | | | | ||
Sbjct 1444206 TTCCATGAAATCGAATGGATTTGTGACGTTGTAAACCTTGT-TGTTACCCAAAGCAACAA 1444264
Query 38951 -TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATA 39009
|||||| ||||| || || || ||||| || |||| || | |||||||||||||
Sbjct 1444265 GTAATCTGTCGGCAACGAACTCGACATACTGACACATCAACTTGGCGTTCATACCCAATA 1444324
Query 39010 ATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatta 39069
|| | || || ||||| ||| || ||||| || ||| || |||| | || |
Sbjct 1444325 ATGACACGGGCAAGGCATCGACAAAGAACTCTTTCTCGATTGTGACTGCTTCGGTGATAA 1444384
Query 39070 tcataattatattattttttgataatttatatttaatatgattcgcatataGTAAACATG 39129
| | || | || | ||||| | ||||| | | | | | | || ||||
Sbjct 1444385 T--TTTTTCGACAATCTCTTGATCTGGTCTATTTTGCAAG-TGAGAGAACAACAAGCATG 1444441
Query 39130 CAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTG 39189
|||| || || ||||||||||| || ||| | || || || || ||||| || ||||
Sbjct 1444442 CAAAGTCGGTGTGTAAACCTTCATCTCTACAAATCAACTCGTTGGAGAAAGTCAAACCTG 1444501
Query 39190 GCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAA---AACTACTAGAAAAGAATA 39246
|||| || ||||| || || | ||| || || || || | | | ||| |||| || |
Sbjct 1444502 GCATCAAACCTCTTTTCTTTAACCAGAAGATAGAAGCGAATGATCCACT-GAAA--AAGA 1444558
Query 39247 TACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACA 39288
||||||| || || || || | || ||| | |||||||
Sbjct 1444559 TACCCTCGACGGCGGCGAACGCAACTAATCTCTCACCAAACA 1444600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135886858000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |