Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20acaciae_20[genbank_20GCA_5F001600675.1_202016-03-01] 10 sequences; 11,065,882 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq2 143 2e-29 seq7 111 1e-19 >seq2 Length=1761743 Score = 143 bits (158), Expect = 2e-29 Identities = 172/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || |||||| || | || ||||| ||||| ||||| || || | Sbjct 928380 CCACCTCTCAATCTCAACACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGAC 928321 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | ||| || | ||| || |||||| | ||||||||||| || || || ||| Sbjct 928320 AAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGA 928261 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || |||||||| ||| || | |||||| | || | |||||||||| ||| || Sbjct 928260 ATTCCTTCCTTGTCTTG-AATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCGAC 928202 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 ||| | ||| ||||| || ||||||||||| ||||| || || ||||| || Sbjct 928201 TTCTAAAGTGATAGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCATCTT 928151 >seq7 Length=997883 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||||||| | || ||||| ||||| ||||| || || | Sbjct 388525 CCACCTCTCAATCTCAACACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 388584 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || | ||| || |||||| | ||||||||||| ||||| || || Sbjct 388585 AAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGG 388644 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| |||||||| ||| || | |||||| | || | || || || ||| || Sbjct 388645 ATTCCCTCCTTGTCTTG-AATCTTGGACTTGACATTGTCAATTGTATCTGATGATTCAAC 388703 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | ||| || || || || || || ||||| || || || ||||| Sbjct 388704 TTCTAAAGTAATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 388751 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | | ||||| || | || ||||| ||||||||||| || || | Sbjct 388753 CCACCTCTCAATCTTAAAACCAAGTGTAAAGTAGATTCCTTTTGAATGTTGTAGTCGGAC 388812 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || | ||| || |||||| | ||||||||||| || || || ||| Sbjct 388813 AAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGA 388872 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| |||||||| ||| || | ||||| | || | ||||| ||| || || Sbjct 388873 ATTCCCTCCTTGTCTTG-AATCTTAGACTTGACGTTATCGATGGTGTCGGAAGACTCGAC 388931 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 ||| | || || || || || || || |||||||| || || ||||| || Sbjct 388932 TTCCAAGGTGATGGTCTTACCGGTCAATGTTTTAACGAAAATTTGCATATT 388982 Score = 89.7 bits (98), Expect = 4e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 || ||||| ||||| ||||| || || | | || | ||| || | ||| || ||| Sbjct 388327 GTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCCATCTTCCAATTGCTTACCA 388386 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTT 29708 ||| | ||||||||||| ||||| || || || || || || ||||| ||| || | || Sbjct 388387 GCAAAGATCAATCTTTGTTGATCAGGTGGGATTCCTTCCTTATCTTG-AATCTTGGACTT 388445 Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768 |||| | || | |||||| || || ||||| | || || || || || || || || Sbjct 388446 GACATTGTCGATAGTGTCGGAGGACTCAACTTCTAAGGTAATGGTCTTACCGGTCAAAGT 388505 Query 29769 TTTAACAAATATCTGCAT 29786 |||||||| || ||||| Sbjct 388506 CTTAACAAAGATTTGCAT 388523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385219153051410