Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20acaciae_20[genbank_20GCA_5F001600675.1_202016-03-01] 10 sequences; 11,065,882 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq2 154 3e-32 >seq2 Length=1761743 Score = 154 bits (170), Expect = 3e-32 Identities = 559/865 (65%), Gaps = 11/865 (1%) Strand=Plus/Minus Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361 |||| ||||| || || || | ||| | | ||||| || | |||| || || || Sbjct 1328730 ACTACTTTGGGTTTAAGACATTGGAAAGGTCCTATTTGCTCAGAATCAACGGTAAGGTCG 1328671 Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421 ||| | || || ||| || || | | ||||| | |||||||| || | ||||| Sbjct 1328670 CAGAAAGGCCCCAGCACTTGATTATGAGAGTTGCTGTCGGTATTCACGGCAACGATATCC 1328611 Query 110422 AAGCTGTTATTGAATGTTATGATGT-ATTAAGTAAAAAGAAAGCTATTCATGCTACTCCT 110480 ||| ||||||| || || | || | ||| | | || |||| ||||| Sbjct 1328610 CTCGTGTGATTGAATCATACAATTTGATGTCGCAAAGATATTT-TACCCATGGCTCTCCT 1328552 Query 110481 ACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATT 110540 || | || ||||| || ||| | | || || | || ||||| | | | || Sbjct 1328551 ACATTGTTCAACGCCGGTACTCCTAGCCCTCAGATGTCCTCGTGCTTCTTGGTTGCTATG 1328492 Query 110541 AACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGA-AACTGCTCTTATTTCTAA 110599 || || || |||||||||||||||||||| || || |||| ||| | || || || Sbjct 1328491 AAAGACGACTCTATTGAAGGTATTTATGACACT-TTGAAGACTTGTGCCTTGATCTCCAA 1328433 Query 110600 AAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGC 110659 | | |||| || |||||| | || |||| ||||||| || | ||||| | || || Sbjct 1328432 GAGCGCTGGTGGTATTGGTTTGCATATTCACAATATTCGTTCCACTGGAGCTTACATTGC 1328373 Query 110660 AACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGC 110719 | || ||| |||| | ||| || |||| ||| ||||||| |||||| | ||||| Sbjct 1328372 TGGTACCAACGGTACTTCCAATGGTATTATTCCTATGGTAAGAGTGTTCAACAATACTGC 1328313 Query 110720 AAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACC 110776 | || || | || ||||| ||||||| || | |||||| | ||| | || || Sbjct 1328312 TAGGTACGTTGACCAGGGTGGTAATAAGAGACCAGGTGCTTTTGCTCTTTATTTGGAGCC 1328253 Query 110777 TTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACA 110836 ||||| || ||||| || || || | || | | || ||||| || |||||| Sbjct 1328252 ATGGCACTCTGATATTTTCGACTTTATCGATATCAGGAAGAATCACGGTAAAGAAGAAAT 1328193 Query 110837 AAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCA 110896 ||||| | || || || ||| |||||||| ||||| | ||||||||| | ||| | Sbjct 1328192 CAGAGCCAGAGACTTGTTCCCAGCATTGTGGATTCCAGATCTTTTCATGAAAAGAGTTGA 1328133 Query 110897 AGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATA 110956 ||||||| ||| || | | | ||| || | | ||| | |||||||| || Sbjct 1328132 GCAAAATGGTGACTGGACTTTATTCTCTCCAAATGAAGCAACAGGTTTGTCTGATGTCTA 1328073 Query 110957 TGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACA 111016 ||| | |||||||| || | ||| | |||||| | |||||| |||| | Sbjct 1328072 CGGAGATGAGTTTGAGGAATTGTACACTAGATATGAGAGAGAAGGACGCGGTCGC--TCT 1328015 Query 111017 AAT-TCCAGCTCAAGAACTT-TGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACT 111074 | || || | |||| || |||| | || | || |||| || ||||| ||| Sbjct 1328014 GTTGTCAAGGCCCAGAAATTGTGGTACTCGATTTTAGAGGCACAGACCGAGACTGGTACT 1327955 Query 111075 CCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACA 111134 || | || |||||||||||| | ||| ||| | || |||| |||||| || | Sbjct 1327954 CCATTCATGTTGTATAAAGATGCTTGTAACAAGAAAACCAACCAAAAGAATTTGGGTATT 1327895 Query 111135 ATTAAGTCTAGTAATTTGTGCTGTG 111159 || ||||| || ||||| |||| Sbjct 1327894 ATCAAGTCATCCAACTTGTGTTGTG 1327870 Score = 150 bits (166), Expect = 4e-31 Identities = 336/492 (68%), Gaps = 13/492 (3%) Strand=Plus/Minus Query 110676 TCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAA 110735 |||| || |||||||| ||| | | || |||||| | ||||| | |||||| | || Sbjct 647759 TCAAGCGGTCTTGTTCCCATGCTCCGGGTTTTCAACAATACTGCGAGATATGTTGACCAG 647700 Query 110736 GGTGGTAAGAGAAAT---GGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATA 110792 |||||||| | || || | |||||||| || || || || |||||| |||||| Sbjct 647699 GGTGGTAATAAAAGACCAGGTGCTTTTGCTATTTACCTTGAGCCATGGCATAGTGATATA 647640 Query 110793 TTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTA 110852 ||||| || |||| | |||||||| || ||||||| ||||||| | |||||| Sbjct 647639 TTTGACTTTCTAGAGTTAAAAAAAAATCACGGTAATGAAGAAAGAAGAGCAAGAGATTTA 647580 Query 110853 TTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCA--AGAAAATGGCATGT 110910 ||||||| | ||| || | |||||||||||| || | || || |||| | | || | Sbjct 647579 TTTTATGGTCTTTGGGTTCCTGATTTATTCATGGAAAGAGTACACGAGAACAAAG-AT-T 647522 Query 110911 GGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGA-TGTATATGGAAAAGAGTTT 110969 |||| | | | ||| || | | || ||| || ||| ||| ||||| ||||| || Sbjct 647521 GGTCGTTATTCTCACCTGATGTTGCCCCAGGTTTAAGTGACTGT-TATGGTAAAGAATTC 647463 Query 110970 GAAGACCTTTACGAAAAATATGAAAAAGAA-GGCAAGTTTCGCAAACAAATTCCAGCTCA 111028 | | || ||| ||| |||||||| |||| ||| | | | ||| | ||||| Sbjct 647462 AATGTGCTATACCAAAGATATGAAACAGAAGGGCTCGCTAGGAGAAC-GGTGAACGCTCA 647404 Query 111029 AGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTA 111088 || | ||| || | || || ||| |||| || || ||||| || | || Sbjct 647403 GAAATTATGGAATGCTATTTTGGAGTCGCAAATTGAGACCGGTGGGCCTTACATACTCTA 647344 Query 111089 TAAAGAT-CATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTA 111147 ||||||| ||| || |||||| ||||||| ||||||||||||||| || ||| | Sbjct 647343 TAAAGATGCAT-GCAACTTCAAATCAAATCAAAAGAATTTAGGAACAATAAAATCTTCAA 647285 Query 111148 ATTTGTGCTGTG 111159 |||| || |||| Sbjct 647284 ATTTATGTTGTG 647273 Score = 109 bits (120), Expect = 1e-18 Identities = 216/319 (68%), Gaps = 9/319 (3%) Strand=Plus/Minus Query 167614 TTGCAGCAATAGACATAGTGTCAAAAACATCGATGAAACTTTTCCAGATTTTTATCGAAC 167673 ||||||| |||| | || | ||| ||| ||||| ||||| ||||||| || Sbjct 1001244 TTGCAGCTATAGGTAAGGTATTAAATGTATCTATGAACAACTTCCACGTTTTTATGTTAC 1001185 Query 167674 CACGTCGTTTGCATTCATCGTAAAAACCATAGTCTCTTGAGATATCAGCACATTCGTGAT 167733 ||| || || |||||||| ||||| ||||| ||| | || || |||||||| |||| Sbjct 1001184 AACGACGCTTACATTCATCATAAAATCCATAAACTCGAGTGACATTTGCACATTCATGAT 1001125 Query 167734 TTCCTCTTAATAAAATTATGTTATTTNNNNNNNNNNNNNTGTAGCAAAATAATAACAAAA 167793 | |||||||||| | | ||| | | |||| || || || | | || Sbjct 1001124 TACCTCTTAATAGGAAAAAGTTTTCTGGGTACTTTATCTTGTAACATAACAAAAGTAGAA 1001065 Query 167794 TTGTTTCTAATGATTTAACACCTCTATCAACATAATCACCTAAAAATATATATTTATTTT 167853 ||||||||||||| | ||| || || ||||||||||| ||||| | ||| || ||| Sbjct 1001064 TTGTTTCTAATGACTGTTTACCCCTGTCCACATAATCACCCAAAAAGAGATAGTTCGTTT 1001005 Query 167854 G-GTTTGAAGGATTATCTA-GTTTTTTAAAAATATTCAAT-AAATCACTAAATTGACCAT 167910 | | | ||| ||| | ||| | ||||| | ||| ||||||| ||||||| | Sbjct 1001004 GAGGTGGAA-----ATCCACATTTGGTGAAAAT-TCGAATCAAATCACCGTATTGACCGT 1000951 Query 167911 GTAAATCACCTACAACCTT 167929 | | |||||| || ||||| Sbjct 1000950 GAACATCACCCACTACCTT 1000932 Score = 107 bits (118), Expect = 5e-18 Identities = 302/451 (67%), Gaps = 21/451 (5%) Strand=Plus/Minus Query 113001 AACTCTCTACTGTTGGCACCAATGCCTACAGCTTCGACTGCACAGATTCTCGGTAATAAT 113060 |||||||| || |||| || |||||||| || || ||| | ||||| | ||||| ||| Sbjct 1327369 AACTCTCTTTTGGTGGCTCCTATGCCTACTGCGTCTACTTCGCAGATCTTGGGTAACAAT 1327310 Query 113061 GAATGTTTCGAGCCAATTACAAGTAATATTTATGTCCGACGTGTTCTAGCAGGTGAGTTT 113120 ||||||||||| || ||| || ||||| | || | || | || ||||| || Sbjct 1327309 GAATGTTTCGAACCTTATACCTCAAACATTTACTCCAGAAGAGTGTTGGCCGGTGAATTC 1327250 Query 113121 GTACTTTGTAATAAATATCTGCAAGAAGAACTTCTCGGAATCGG-TAAATGGAACAATGA 113179 | || ||| ||| || || ||| | || | || | ||||| || Sbjct 1327249 CAAATTGTCAATCCATACTTGTTGCGTGA-CTTGGCTGATTTGGGTCTTTGGAATGATTC 1327191 Query 113180 AGTGAAAAACTCCATTATTGCTAATCAAGGTTCGGTTCAAC-AT--CTAAAATTGCCTGA 113236 |||| ||| ||| ||||||||| | ||||| ||||| || | ||| | || || Sbjct 1327190 TATGAAGAACAACATCATTGCTAATAATGGTTCTATTCAAGGATTACCAAACATTCCAGA 1327131 Query 113237 TTGCGTGAAAGA-TGTATTTAAGACTATTTGGGAAATTAAGCAA---CGTGTCGTAATTG 113292 | | || |||| | ||| ||| ||| ||||||| ||| ||| | | || |||| Sbjct 1327130 T-GAGTTGAAGACTTTATATAAAACTGTTTGGGAGATTTCTCAAAAGCATATC---ATTG 1327075 Query 113293 ATATGGCTGCAGATCGTGGCAAGTTTATCGATCAATCTCAGTCGATGAACTTATTTATGC 113352 |||||||||| || | | || |||||||| ||||| || |||| |||| | Sbjct 1327074 ATATGGCTGCTGACAGAGCTGCTTTCATCGATCAGTCTCAATCCTTGAA--TATTCACAT 1327017 Query 113353 CGGACACCTCACCA--GATAAGGTGACATC--TGCTCTATTTTACGGCTGGAAAAAAGGT 113408 | | ||| ||| | | |||| |||| || ||| || | ||||| ||||| |||||| Sbjct 1327016 CAAAGACCCCACAATGGGTAAGTTGACTTCCATGCACT--TCTACGGTTGGAAGAAAGGT 1326959 Query 113409 TTAAAAACAGGTATGTATTATTTGCGAACAC 113439 || || || ||||||||||| ||| | |||| Sbjct 1326958 TTGAAGACCGGTATGTATTACTTGAGGACAC 1326928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812647939610