Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20acaciae_20[genbank_20GCA_5F001600675.1_202016-03-01] 10 sequences; 11,065,882 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq7 122 8e-23 seq2 109 5e-19 >seq7 Length=997883 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || || || ||||| ||||| ||| ||||||||||||||||| |||| | Sbjct 388753 CCACCTCTCAATCTTAAAACCAAGTGTAAAGTAGATTCCTTTTGAATGTTGTAGTCGGAC 388812 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || |||| | || |||| |||||||| ||||| ||||| | || ||||| | |||| Sbjct 388813 AAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGA 388872 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| ||||| ||| | | | | |||||| || || || Sbjct 388873 ATTCCCTCCTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGACTCGACT 388932 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||| || ||||| ||||| ||||| || || || ||||| Sbjct 388933 TCCAAGGTGATGGTCTTACCGGTCAATGTTTTAACGAAAATTTGCAT 388979 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||||||||||||||||| ||| |||||||| |||||||| |||| | Sbjct 388525 CCACCTCTCAATCTCAACACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 388584 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || |||| | || |||| |||||||| ||||| ||||| | || || || | || Sbjct 388585 AAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGG 388644 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| ||||| ||| | | | | | || || ||||| || Sbjct 388645 ATTCCCTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATTGTATCTGATGATTCAACT 388704 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | || || || ||||| ||||| ||||| || || || ||||| Sbjct 388705 TCTAAAGTAATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 388751 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || || | ||| ||||| ||||||||||| || ||| ||||| |||||||| || | | Sbjct 387815 CCTCCCCTTAATCTCAAGACCAAATGTAAAGTGGACTCTTTTTGGATGTTGTAGTCAGAC 387874 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTC 35622 ||||||| |||| |||| |||||||| || || ||||| | ||| ||||| Sbjct 387875 AAGGTTCTACCGTCTTCCAATTGCTTACCGGCGAAAATCAATCTCTGTTGGTC 387927 >seq2 Length=1761743 Score = 109 bits (120), Expect = 5e-19 Identities = 170/241 (71%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 35499 TCTCTTTATTTCCACCACGT---AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAA 35555 |||||| || ||||||| | || ||||||||||| || || ||| |||||||| | Sbjct 928393 TCTCTTC-TTACCACCACCTCTCAATCTCAACACCAAGTGCAAGGTAGATTCCTTTTGGA 928335 Query 35556 TGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCT 35615 ||||||| || | |||||||| | || |||| |||||||| ||||| ||||| | | Sbjct 928334 TGTTGTAGTCAGACAAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTTT 928275 Query 35616 GCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGT 35675 | ||||| | ||||| | |||||||| ||||| ||| | | | | | |||| Sbjct 928274 GTTGGTCTGGAGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGT 928215 Query 35676 CGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735 | ||||| || || | ||||| || ||||| || || || || || || || |||| Sbjct 928214 CAGAAGATTCGACTTCTAAAGTGATAGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCA 928155 Query 35736 T 35736 | Sbjct 928154 T 928154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793543650800