Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20acaciae_20[genbank_20GCA_5F001600675.1_202016-03-01] 10 sequences; 11,065,882 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq2 161 8e-35 seq1 89.7 4e-13 >seq2 Length=1761743 Score = 161 bits (178), Expect = 8e-35 Identities = 405/602 (67%), Gaps = 24/602 (4%) Strand=Plus/Minus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 ||||| |||| || || | || || || || |||||||||||||| || || ||||| Sbjct 1445024 TTTGTGTTGTTCCCTATCAAGTACCACGAGATTTGGCAAATGTACAAGAAGGCCGAGGCG 1444965 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGATTGC--- 43815 || || ||||| || || || |||||||| ||||| | ||| | |||| | Sbjct 1444964 TCTTTCTGGACTGCGGAGGAGATTGATTTGGGCAAAGATATC-CACGACTGGAAGGAGAG 1444906 Query 43816 ATTAAAACCACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCG 43874 ||| || | |||| || || | || || || | ||||| || |||||||| | Sbjct 1444905 ATTGAA-CGACAACGAGAAGTACTTCATTTCAAGAATCTTGGCTTTCTTTGCTGCATCGG 1444847 Query 43875 ACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAG 43934 | || || ||||| || || |||||| ||| | || || ||| | ||||||| Sbjct 1444846 ATGGTATTGTCAACGAGAACTTGGTTGAAAATTTTTCTGCTGAGGTGCAAATTCCAGAAG 1444787 Query 43935 CACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTC 43994 | ||||| || ||||| ||||| || || || || || || || | ||| | Sbjct 1444786 CCAAGTGTTTCTACGGGTTCCAAATCATGATGGAGAACATCCACTCTGAGACCTACTCTT 1444727 Query 43995 TTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGA----TTGTTTAATGCG 44050 | || || || || |||||||| || || ||||||| || ||||| || || Sbjct 1444726 TGCTTATCGACACCTACATCAAGGACCCCCA--AGAAGCA--GACTTTTTGTTCAACGCC 1444671 Query 44051 ATAGA-AACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTC 44109 || || |||| | | || || || | || || |||||||| | | ||||| || Sbjct 1444670 ATCGAGAACATTCCATGT-ATCAAGAAGAAGGCTGACTGGGCTTTGAGGTGGATCAACGA 1444612 Query 44110 ---AAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTT 44166 || || | ||||| || || | || ||||| || | || || || || || | Sbjct 1444611 CGGAAGTGCCTTGTTTGGTGAGAGATTAGTTGCGTTCGCCGCCGTCGAGGGTATCTT--T 1444554 Query 44167 TTCAG--GATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTG 44224 ||||| |||| || || | || || |||||||||||| ||||||||||||| || ||| Sbjct 1444553 TTCAGTGGATCATTCGCTTCTATCTTCTGGTTAAAGAAAAGAGGTTTGATGCCAGGTTTG 1444494 Query 44225 ACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTG 44284 || || || || ||||| || || | |||||||| ||||| ||| ||||| |||||| Sbjct 1444493 ACTTTCTCCAACGAGTTGATTTGTAGAGATGAAGGTTTACACACCGACTTTGCATGCTTG 1444434 Query 44285 TT 44286 || Sbjct 1444433 TT 1444432 >seq1 Length=2045646 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 19621 GACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATT 19680 |||| |||||||||||| | || ||||| | |||||||| |||| |||| || || Sbjct 1080349 GACAATGTTGTCAATCAGTTGTTGGCAAAAATGGACGGTGTAGACCAGTTGAACAACATC 1080408 Query 19681 TTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGT 19740 ||| | ||||| ||||||||||| |||| || || || | || || || |||| ||| Sbjct 1080409 TTAATCATTGGTATGACTAATAGGTTGGACTTGATTGATAATGCTTTGTTGAGACCAGGT 1080468 Query 19741 CGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGACGTGTGGAAATTTT 19799 | || ||||| | || ||||| || || || ||| |||||| || ||||| Sbjct 1080469 AGATTCGAAATTCAAATTGAAATAGCATTGCCGGACGAAAAAGGACGTAAAGACATTTT 1080527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455951560050