Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20acaciae_20[genbank_20GCA_5F001600675.1_202016-03-01] 10 sequences; 11,065,882 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq7 140 3e-28 seq2 116 3e-21 >seq7 Length=997883 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| ||||||| ||| | |||||| | ||||| ||| | || Sbjct 388751 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATTACTTTAGAAGTTGAATCATCA 388692 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | ||||| || ||||||||||| || || || ||||| |||||| Sbjct 388691 GATACAATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAGGGAATCCCACCTGATCAA 388632 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || || ||||||||||| | || | ||||| |||||| Sbjct 388631 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCCGACTACAAC 388572 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || ||||||||||| ||| | ||| | ||||| || Sbjct 388571 ATCCAAAAGGAATCTACTTTACATTTGGTGTTGAGATTGAGAGGTGGTAT 388522 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| ||||||| ||| | || || | ||||| || | ||| Sbjct 388979 ATGCAAATTTTCGTTAAAACATTGACCGGTAAGACCATCACCTTGGAAGTCGAGTCTTCC 388920 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||||||||| || || || || || || ||| Sbjct 388919 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAGGAGGGAATTCCTCCAGACCAA 388860 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || || ||||||||||| | || | ||||| |||||| Sbjct 388859 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCCGACTACAAC 388800 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||||||| || || ||||| |||||||| | ||| | ||||| || Sbjct 388799 ATTCAAAAGGAATCTACTTTACACTTGGTTTTAAGATTGAGAGGTGGTAT 388750 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || ||| ||||||| ||| | ||||| | ||||| || | ||| Sbjct 388523 ATGCAAATCTTTGTTAAGACTTTGACCGGTAAGACCATTACCTTAGAAGTTGAGTCCTCC 388464 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || |||||||| || ||||| || ||||| |||||| Sbjct 388463 GACACTATCGACAATGTCAAGTCCAAGATTCAAGATAAGGAAGGAATCCCACCTGATCAA 388404 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || || ||||||||||| | || | ||||| |||||| Sbjct 388403 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCCGACTACAAC 388344 Query 27168 ATTCAAAAGGAGTCGAC 27184 || |||||||| || || Sbjct 388343 ATCCAAAAGGAATCTAC 388327 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 27093 ATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACC 27152 || ||||| || |||||| | || || | |||||| || |||||||||||| || ||| Sbjct 387936 ATCCCACCAGACCAACAGAGATTGATTTTCGCCGGTAAGCAATTGGAAGACGGTAGAACC 387877 Query 27153 GTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGT 27212 | || || |||||||| ||||| ||||| || ||||||||||| ||| | || |||| Sbjct 387876 TTGTCTGACTACAACATCCAAAAAGAGTCCACTTTACATTTGGTCTTGAGATTAAGGGGA 387817 Query 27213 GG 27214 || Sbjct 387816 GG 387815 >seq2 Length=1761743 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || | || || ||| |||| ||| | ||||| ||| | || Sbjct 928154 ATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACTATCACTTTAGAAGTCGAATCTTCT 928213 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || ||||||||||| ||||| || || || || ||| Sbjct 928214 GACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCAGACCAA 928273 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || || |||||||| || | ||| | || || |||||| Sbjct 928274 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTACAAC 928333 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || |||||||| || ||||| || ||||| ||| | ||| | ||||| Sbjct 928334 ATCCAAAAGGAATCTACCTTGCACTTGGTGTTGAGATTGAGAGGTGG 928380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918345635200