Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20acaciae_20[genbank_20GCA_5F001600675.1_202016-03-01] 10 sequences; 11,065,882 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq7 158 3e-33 seq2 147 5e-30 seq1 86.0 1e-11 >seq7 Length=997883 Score = 158 bits (174), Expect = 3e-33 Identities = 159/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| | ||| ||||| ||||| | ||||| |||| ||||||||| |||||||| | || Sbjct 388776 GTGTAAAGTAGATTCCTTTTGAATGTTGTAGTCGGACAAAGTTCTGCCATCTTCCAATTG 388835 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| ||||| ||||| | || ||||||||| || ||||| || ||||||||||| ||||| Sbjct 388836 CTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATTCCCTCCTTGTCTTGAATCTT 388895 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||| || ||||||||||| || | || || || || ||||| ||||| || || Sbjct 388896 AGACTTGACGTTATCGATGGTGTCGGAAGACTCGACTTCCAAGGTGATGGTCTTACCGGT 388955 Query 225690 CAAAGTTTTTATGAACACTTGCATTTT 225716 ||| ||||| | ||| | |||||| || Sbjct 388956 CAATGTTTTAACGAAAATTTGCATATT 388982 Score = 150 bits (166), Expect = 4e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | || | ||| ||||| ||||||| ||||| |||| ||||||||| || Sbjct 388536 TCTCAACACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCC 388595 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | ||||| ||||| ||||| | || |||||| || || || || || ||||| Sbjct 388596 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGGATTCCCTCCTT 388655 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| ||||| ||| ||| || || || ||||| | ||| || ||||| || || Sbjct 388656 GTCTTGAATCTTGGACTTGACATTGTCAATTGTATCTGATGATTCAACTTCTAAAGTAAT 388715 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || ||||| ||||| | ||| | |||||| Sbjct 388716 GGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 388751 >seq2 Length=1761743 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | ||| | || ||||| ||||||| ||||| || | ||| ||||| || Sbjct 928369 TCTCAACACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTGCC 928310 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| || | ||||| ||||| ||||| | || ||||||||| || ||||| |||||||| Sbjct 928309 ATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATTCCTTCCTT 928250 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| ||||| ||| ||| || || ||||| || | ||| || ||||| ||||| Sbjct 928249 GTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCGACTTCTAAAGTGAT 928190 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| || || || || || | ||| | |||||| || Sbjct 928189 AGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCATCTT 928151 >seq1 Length=2045646 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||||||||||||||| || ||||| || || || ||||||||||| |||||||| Sbjct 450009 GAAAATTTGACCATCAGTAATGGAAATAACGTTGGTTGGAATATAAGCAGAGACATCACC 450068 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574 |||| ||||| | | || || || || | || |||||||| Sbjct 450069 ACCTTGGGTTTCAATGATTGGCAAAGCGGTCAAAGAACCACCACC 450113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192531047206940