Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20acaciae_20[genbank_20GCA_5F001600675.1_202016-03-01] 10 sequences; 11,065,882 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq2 176 9e-39 seq7 167 5e-36 seq5 89.7 1e-12 >seq2 Length=1761743 Score = 176 bits (194), Expect = 9e-39 Identities = 158/196 (81%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966 ||| ||||||||||||||||||| |||| || | ||||||||| | ||| || || |||| Sbjct 928345 TTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTGCCATCCTCCAATTGCTTACCAGCAA 928287 Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026 ||||||| | ||||||||| ||||| || ||||||||||| ||||| | || || Sbjct 928286 AGATCAATCTTTGTTGGTCTGGAGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACAT 928227 Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086 | || |||||||| |||| ||||||||| | |||||| |||||||| || || ||||||| Sbjct 928226 TGTCAATAGTGTCAGAAGATTCGACTTCTAAAGTGATAGTCTTACCAGTTAAGGTCTTAA 928167 Query 283087 CGAATATCTGCATTTT 283102 |||| || ||||| || Sbjct 928166 CGAAAATTTGCATCTT 928151 >seq7 Length=997883 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||||| || ||| ||||| ||||||||||| | | || | |||||| || Sbjct 388771 ACCAAGTGTAAAGTAGATTCCTTTTGAATGTTGTAGTCGGACAAAGTTCTGCCATCTTCC 388830 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || ||||||||||| | ||||||||| ||||| |||||||||||||| Sbjct 388831 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATTCCCTCCTTGTCTTGA 388890 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | || ||| ||||||| ||||| |||| |||||||| | ||||| |||||| Sbjct 388891 ATCTTAGACTTGACGTTATCGATGGTGTCGGAAGACTCGACTTCCAAGGTGATGGTCTTA 388950 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || ||||| || |||||||| || ||||| || Sbjct 388951 CCGGTCAATGTTTTAACGAAAATTTGCATATT 388982 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| |||||| || ||| ||||||||||||||||| | | || | |||||| || Sbjct 388543 ACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCCATCTTCC 388602 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || ||||||||||| | |||||| ||| || || |||||||||||||| Sbjct 388603 AATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGGATTCCCTCCTTGTCTTGA 388662 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | || || | || || || || || | ||| ||||| | ||| || |||||| Sbjct 388663 ATCTTGGACTTGACATTGTCAATTGTATCTGATGATTCAACTTCTAAAGTAATGGTCTTA 388722 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| || || ||||| || ||||| Sbjct 388723 CCGGTCAATGTTTTGACGAAAATTTGCAT 388751 Score = 140 bits (154), Expect = 7e-28 Identities = 146/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||| | | || | |||||| || | ||| || || ||||| Sbjct 388332 TTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAA 388391 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | |||||| ||| || || || ||||| ||||| ||||| | || || | Sbjct 388392 GATCAATCTTTGTTGATCAGGTGGGATTCCTTCCTTATCTTGAATCTTGGACTTGACATT 388451 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||||||||| || | || ||||| | || || |||||||| |||||||||||||| Sbjct 388452 GTCGATAGTGTCGGAGGACTCAACTTCTAAGGTAATGGTCTTACCGGTCAAAGTCTTAAC 388511 Query 283088 GAATATCTGCAT 283099 || || ||||| Sbjct 388512 AAAGATTTGCAT 388523 >seq5 Length=1445570 Score = 89.7 bits (98), Expect = 1e-12 Identities = 126/176 (72%), Gaps = 6/176 (3%) Strand=Plus/Plus Query 317029 GGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCA 317088 ||||| ||||| | || ||||| | || |||||||||| || ||||| |||||||| Sbjct 270138 GGGAAACCTTCGACTTGGCCGTTAGCGATAGCCCTCATCAAAGTGGACTTACCAGCACCG 270197 Query 317089 TTGGGGCCGCAAAGACCATACCGA---TTTCCCTTCTTCAGATTAAAACGGGTGTTGTTC 317145 || || || || | |||||| | |||| |||||| | || |||| ||||| Sbjct 270198 TTTGGACCACACAAACCATATCTTCTGTTTC---TCTTCAATCTGAATTGGGTCTTGTTT 270254 Query 317146 AGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 | | |||||| |||| || |||| ||||||||||| | ||||| ||| || || Sbjct 270255 AACAAGATCTTAGCACCGTAAGCCAAGGAGAACTCACAGTTACACAAGTCTTCACC 270310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046739065886540