Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2 147 5e-30 seq11 116 8e-21 >seq2 Length=1085221 Score = 147 bits (162), Expect = 5e-30 Identities = 581/895 (65%), Gaps = 27/895 (3%) Strand=Plus/Plus Query 229758 GTTCCCAATCCAATATCCCGATATGTGGGATATGTACAAGAAGGCGGTGGCAACTTTCTG 229817 |||||||||| ||| | ||| || ||| | |||||||||||||| | ||| ||||||| Sbjct 236944 GTTCCCAATCAGATACCACGAGATCTGGCAGATGTACAAGAAGGCAGAGGCTTCTTTCTG 237003 Query 229818 GACCACTGAGGAAGTTCCTCT--GAACGCAGACGTCGTCGACTGGCGTGAGAAACTCAAT 229875 |||| | |||||| | ||| | | | | || | | ||||||| | || | || Sbjct 237004 GACCGCCGAGGAAATAGATCTTGGTAAGGACACC-CAT-GACTGGCAAAACAAGATGAAC 237061 Query 229876 GACGACGAACGTCATTTCATCAAACACATCCTAGGTTTTTTCGCAGGCTCCGATGGTATT 229935 || |||| | |||||| | ||| | | ||| ||||| | ||| ||||||||| Sbjct 237062 GAGAACGAGAGATTTTTCATTTCTCGTATCTTGGCTTTCTTCGCTGCCTCTGATGGTATT 237121 Query 229936 GTGATGGAAAATCTGCAGACCAACTTTAGTGTGGAAGTAACGGTTCCAGAGGCACGGCAA 229995 || | || || || ||||| | || || || ||||| || | Sbjct 237122 GTCAATGAGAACTTGGTCGAGAACTTCTCCGCTGAGGTCCAAGTCCCAGAAGCCAAGTGT 237181 Query 229996 TTTTATGCTTACCAAACATTCAACGAATCTATCCATTCTGAACAATATGCTCTGCTTATC 230055 || || | || ||| | | | || |||||| ||||| ||| | ||||||| Sbjct 237182 TTCTACGGTTTCCAGATTATGATGGAGAATATCCACTCTGAGACATACTCATTGCTTATT 237241 Query 230056 GACGCGCTTATTTCCGACGAGCAAGAACGGAACGAGCTTTTTGAT----GCCATTGAAAA 230111 ||| | ||| ||| | || | ||| ||||||| | ||||| || || Sbjct 237242 GACACCTACATTAAGGACCCTAAGGA---GGCCGA-CTTTTTGTTTAACGCCATCGAGAA 237297 Query 230112 CATCCCGGCGGTTCATAACAAGGCAAAGTGGGCTCAGAAATGGCTAGAACCTGGTAA--- 230168 |||||| |||| || ||||| | ||||| || |||| | | || | Sbjct 237298 CATCCCATGCATTCAAAAGAAGGCTGACTGGGCCTTGAGATGGATCAACGATGACGATGC 237357 Query 230169 ATCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAG 230228 || ||| | ||| | | || || | | | |||||||||||| || | ||| | | | Sbjct 237358 ATTGTTCGGTGAGAGATTGGTTGCTTTCGCGGCTGTTGAAGGTAT-CT-TCTTCAGTG-G 237414 Query 230229 TTTCTGCGCC---ATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTC 230285 || || ||| ||||| ||| || ||| | ||| |||||||||| | | || Sbjct 237415 TTCCTTCGCATCTATCTTCTGGTTGAAGAAGAGAGGCTTGATGCCTGGTTTGACCTTCTC 237474 Query 230286 TAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATT 230344 ||||||||| ||| | || ||||| ||| | || || | | |||| | | ||| | Sbjct 237475 TAACGAGTTGATCTGCCGTGACGAAGGTTTGCA-CACCGACTTCGCCTGTTTGTTGTTCT 237533 Query 230345 CAAAGCTCCAGAACA-AGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTT 230403 | | | |||||| | | | | | || | || || | ||||| |||||||| ||| Sbjct 237534 CGCACTTGGAGAACAGACCAAACCCT-GAAATTGTTGAAAAGATCATCACAGAAGCTGTT 237592 Query 230404 GAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGC-ATGAACGC 230462 | | ||| || |||||| | ||||||| | || || | || |||| |||||||| Sbjct 237593 GGCATCGAGAAAGAGTTCTTCACTGACGCTTTACCC-GTTTCATTGTTGGGTATGAACGC 237651 Query 230463 TGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTA 230522 | | ||| | || || ||||||||||||| ||| | | || ||||| | ||| | Sbjct 237652 AAAGTTAATGTGCCAATATGTCGAATTCGTAGCTGACAGATTGTTGGTTGCTTTGGGTAA 237711 Query 230523 CGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGG 230582 | |||| || |||||| || ||||| |||| |||||||| ||| ||| | || Sbjct 237712 CAAGAAGGTCTACAACGTTACAAACCCATTTGACTTTATGGAAAACATCTCGTTGGCTGG 237771 Query 230583 GAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||||| ||||||||||||||| | ||||||||||| || | | ||||||| ||| Sbjct 237772 TAAGACAAACTTCTTCGAAAAGAGAGTCAGTGACTACCAAAAGGCTGGTGTCATG 237826 >seq11 Length=2453602 Score = 116 bits (128), Expect = 8e-21 Identities = 179/253 (71%), Gaps = 2/253 (1%) Strand=Plus/Minus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 || ||||||||||| |||| | |||||| |||||| | |||||||| | ||| || | Sbjct 2212334 ATTATTACAGAAGCTGTTGTTATCGAAAAAGAGTTCTTCAGTGACGCTTTACCA-GTTTC 2212276 Query 230446 CTTATT-GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504 || || || ||||| | | | ||| | || || | ||||| || || ||| | | Sbjct 2212275 ATTGTTGGGTATGAATTCAAAGTTGATGTGTCAATATGTTGAATTTGTGGCTGACAGATT 2212216 Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564 || || || | ||| || |||| || |||||| || ||||| |||| |||||||| Sbjct 2212215 GTTAGTGGCTTTGGGTAACAAGAAGGTCTACAACGTTACAAACCCATTTGACTTTATGGA 2212156 Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624 ||| ||| | || ||||| |||||||| |||||| | |||||||| || || | Sbjct 2212155 AAACATCTCGTTGGCTGGTAAGACAAACTTCTTTGAAAAGAGAGTCAGTGATTACCAAAA 2212096 Query 230625 GCCTGGTGTGATG 230637 | ||||||| ||| Sbjct 2212095 GGCTGGTGTCATG 2212083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823769592710