Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq17 105 6e-18 seq16 105 6e-18 seq11 105 6e-18 seq10 96.9 3e-15 >seq17 Length=1373282 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || |||| || || | |||| ||||| |||||||||||||| ||||| ||||| Sbjct 1192314 GTTACCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTC 1192255 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 | | |||| |||| |||| ||| || || ||| |||| | |||||| ||||| Sbjct 1192254 GGATAAGGTTCTACCGTCTTCCAACTGCTTACCAGCAAAAATTAATCTCTGTTGGTCTGG 1192195 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | || |||||||| |||||| || || | | | | || ||| || ||| Sbjct 1192194 TGGAATACCCTCCTTGTCTTGGATCTTAGACTTGACGTTGTCAATGGTGTCAGAGGACTC 1192135 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| |||||| ||||| ||||| || || ||||| || || ||||| Sbjct 1192134 AACCTCCAAGGTAATAGTCTTACCGGTCAAGGTCTTGACGAAAATCTGCAT 1192084 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || || | |||| || || |||||||||||||| ||||| ||||| | Sbjct 1191854 CCACCTCTCAATCTCAAAACCAAGTGTAAGGTGGACTCCTTTTGGATGTTGTAGTCGGAT 1191795 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | |||| |||| |||| || || || || | || | ||| |||||||| || Sbjct 1191794 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGTGGA 1191735 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| || || | | | | || ||| || ||| Sbjct 1191734 ATACCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCAACC 1191675 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 |||| || |||||||| || ||||| || || || || |||||||| || Sbjct 1191674 TCCAAAGTGATGGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCATCTT 1191625 >seq16 Length=1434301 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || || | |||| ||||| |||||||||||||| ||||| ||||| | | Sbjct 509184 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCAGAC 509125 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | |||| | | ||||||| || || || ||| |||| | |||||| ||||| || Sbjct 509124 AAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGTTGGTCAGGTGGG 509065 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| || || | | ||| ||| || | |||| Sbjct 509064 ATTCCCTCCTTGTCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCGGAAGACTCCACC 509005 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 |||| ||| || ||||| || || || || || || || |||||||| ||| Sbjct 509004 TCCAAGGTGATAGTCTTACCTGTCAAGGTCTTAACGAAAATTTGCATCTTG 508954 >seq11 Length=2453602 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032 |||||||||||||||||||| ||||| ||||| | || |||| | ||||||| || Sbjct 170434 TGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCCATCCTCCAATTGC 170493 Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092 || || ||| |||| | |||||||||||| || | || |||||||| |||||| Sbjct 170494 TTACCAGCAAAAATCAATCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGGATCTTG 170553 Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152 || || | | | || ||| || ||| |||| |||||| ||||| || || Sbjct 170554 GACTTGACGTTATCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATTGTCTTACCAGTC 170613 Query 21153 AACGTTTTGACAAATATTTGCAT 21175 || || ||||| || |||||||| Sbjct 170614 AAAGTCTTGACGAAAATTTGCAT 170636 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032 |||||||||||||||||||| ||||| ||||| | || |||| | ||||||| || Sbjct 170662 TGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCCATCCTCCAATTGC 170721 Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092 || || || |||| | |||||||||||| || | || |||||||| |||||| Sbjct 170722 TTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGGATCTTG 170781 Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152 || || | | | || ||| || ||| |||| |||||| ||||| || || Sbjct 170782 GACTTGACGTTATCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATTGTCTTACCAGTC 170841 Query 21153 AACGTTTTGACAAATATTTGCAT 21175 || || ||||| || |||||||| Sbjct 170842 AAAGTCTTGACGAAAATTTGCAT 170864 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032 |||||||||||||||||||| ||||| ||||| | || |||| | ||||||| || Sbjct 170890 TGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCCATCCTCCAATTGC 170949 Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092 || || ||| |||| | |||||||||||| || | || |||||||| |||||| Sbjct 170950 TTACCAGCAAAAATTAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCTTGGATCTTG 171009 Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152 || || | | | || ||| || ||| |||| |||||| ||||| || || Sbjct 171010 GACTTGACGTTATCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATTGTCTTACCAGTC 171069 Query 21153 AACGTTTTGACAAATATTTGCAT 21175 || || ||||| || || ||||| Sbjct 171070 AAAGTCTTGACGAAAATCTGCAT 171092 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032 |||||||||||||||||||| ||||| ||||| | || |||| | ||||||| || Sbjct 171118 TGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCCATCCTCCAATTGC 171177 Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092 || || ||| |||| | |||||||||||| || | || |||||||| |||||| Sbjct 171178 TTACCAGCAAAAATCAATCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGGATCTTG 171237 Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152 || || | | | || ||| || ||| |||| || |||||||| || ||| Sbjct 171238 GACTTGACGTTATCAATGGTGTCAGAGGACTCAACCTCCAAAGTGATGGTCTTACCAGTT 171297 Query 21153 AACGTTTTGACAAATATTTGCATTTT 21178 | || || || || |||||||| || Sbjct 171298 AGGGTCTTAACGAAAATTTGCATCTT 171323 >seq10 Length=3096056 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || || | |||| ||||| || ||||||||||| || |||||||| | | Sbjct 917531 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATATTATAGTCAGAC 917590 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | | ||||||| || || || ||| |||| | ||| || ||||| || Sbjct 917591 AAAGTTCTGCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGA 917650 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||| || || | | ||| ||| || | |||| Sbjct 917651 ATTCCCTCCTTGTCTTGAATCTTGGACTTAACATTGTCGATAGTGTCGGAAGACTCCACC 917710 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 |||| ||| || ||||| || || || ||||| ||||| |||||||| ||| Sbjct 917711 TCCAAGGTGATAGTCTTACCTGTCAAGGTTTTAACAAAAATTTGCATCTTG 917761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422259112513172