Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2 205 1e-47 seq11 174 2e-38 seq17 95.1 1e-14 >seq2 Length=1085221 Score = 205 bits (226), Expect = 1e-47 Identities = 568/868 (65%), Gaps = 15/868 (2%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 ||||| || || ||||||| ||||| || || | ||||| || ||||| || Sbjct 236906 GAGCCCTTGTTGGTCGAGAACAAGCGCCGTTTTGTCTTGTTCCCAATCAGATACCACGAG 236965 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| ||||| || |||||||||| |||||| | || || Sbjct 236966 ATCTGGCAGATGTACAAGAAGGCAGAGGCTTCTTTCTGGACCGCCGAGGAAATAGATCTT 237025 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCT---TGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| |||||| | | ||||||| |||||| | |||||| Sbjct 237026 GGTAAGGACACCCATGACTGGCAAAACAAGATGAACGAGAACGAGAGATTTTTCATTTCT 237085 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 | | |||| || ||||| ||| || || || ||||| ||||| |||||||| Sbjct 237086 CGTATCTTGGCTTTCTTCGCTGCCTCTGATGGTATTGTCAATGAGAACTTGGTCGAGAAC 237145 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | ||||| || || | || || ||| |||||||| || ||||| ||| Sbjct 237146 TTCTCCGCTGAGGTCCAAGTCCCAGAAGCCAAGTGTTTCTACGGTTTCCAGATTATGATG 237205 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT---GCGCTCTTCG 116929 ||||| | ||||| || | || || || || ||||| ||| | | | || | Sbjct 237206 GAGAATATCCACTCTGAGACATACTCATTGCTTATTGACACCTACATTAAGGACCCTAAG 237265 Query 116930 GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989 |||| | | |||||| ||||||||||||| || || ||| | || ||||||| Sbjct 237266 GAGGCCGACTT---TTTGTTTAACGCCATCGAGAACATCCCATGCATTCAAAAGAAGGCT 237322 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049 || ||||| || | |||||| || || || ||||| ||| | |||| || Sbjct 237323 GACTGGGCCTTGAGATGGATCAACGATGACGATGCATTGTTCGGTGAGAGATTGGTTGCT 237382 Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109 |||||||| || || || ||||||| || ||||| | || || ||| | ||| Sbjct 237383 TTCGCGGCTGTTGAAGGTATCTTCTTCAGTGGTTCCTTCGCATCTATCTTCTGGTTGAAG 237442 Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169 || | ||| | ||||| || |||| ||| |||||| | |||| | | ||||| ||| Sbjct 237443 AAGAGAGGCTTGATGCCTGGTTTGACCTTCTCTAACGAGTTGATCTGCCGTGACGAAGGT 237502 Query 117170 CTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCG 117229 |||| |||||| ||||||||| ||||| ||| |||| | | |||| | | | | Sbjct 237503 TTGCACACCGACTTCGCCTGTTTGTTGTTCTCGCACTTGGAGAACAGACCAAACCCTGAA 237562 Query 117230 CGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCG 117289 || ||||| |||| || || || | ||||||| | ||| |||| || || Sbjct 237563 ATTGTTGAAAAGATCATCACAGAAGCTGTTGGCATCGAGAAAGAGTTCTTCACTGACGCT 237622 Query 117290 CTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACG---ATGTCGCAATACATCGAGTTC 117346 | || || || |||| | || || || | |||| ||||| |||| ||| Sbjct 237623 TTACCCGTTTCATTGTTGGGTATGAA---CGCAAAGTTAATGTGCCAATATGTCGAATTC 237679 Query 117347 GTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCG 117406 || || ||||| || || | | ||| | ||| ||||||| | ||||| Sbjct 237680 GTAGCTGACAGATTGTTGGTTGCTTTGGGTAACAAGAAGGTCTACAACGTTACAAACCCA 237739 Query 117407 CTGGACTTTATGAACCTCATCTCCTTGG 117434 | ||||||||| | |||||| |||| Sbjct 237740 TTTGACTTTATGGAAAACATCTCGTTGG 237767 >seq11 Length=2453602 Score = 174 bits (192), Expect = 2e-38 Identities = 420/634 (66%), Gaps = 9/634 (1%) Strand=Plus/Minus Query 116600 CGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCC 116659 ||||| || ||| | || || || ||||| || || |||| ||||| |||||||| Sbjct 2212979 CGCCGTTTTGTGTTGTTTCCTATCAGATACCACGAGATCTGGCAAATGTATAAAAAGGCA 2212920 Query 116660 GAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAG 116719 || || || |||||||| | |||||| | || | ||||||||| |||||| | Sbjct 2212919 GAAGCTTCTTTCTGGACTGCCGAGGAAATAGATTTAGGCAAGGACACCCATGACTGGCAA 2212860 Query 116720 CGCT---TGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCC 116776 | |||| || ||||| | |||||| | | | || ||||| || ||| Sbjct 2212859 AACAAGATGAATGAGAACGAAAGATTTTTCATTTCTCGTATCTTAGCTTTTTTTGCGGCC 2212800 Query 116777 AGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCC 116836 || || || ||||||||||| |||||||| ||| | ||||| || ||| | Sbjct 2212799 TCTGATGGTATTGTCAACGAGAACTTGGTCGAGAACTTCTCCGCCGAGGTCCAAGTGCCA 2212740 Query 116837 GAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTAT 116896 || || ||| |||||||| ||||| || ||||||||| | ||||| |||| || Sbjct 2212739 GAAGCCAAGTGTTTCTACGGTTTTCAAATTATGATGGAGAACATCCACTCTGAAACATAC 2212680 Query 116897 TCGACCCTCATCGACACGTACGT---GCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAAC 116953 || || || || || ||| | | | || |||| | | |||||| || Sbjct 2212679 TCATTGCTTATTGATACCTACATTAAGGACCCTAAAGAGGCTGACTT---TTTGTTTAAT 2212623 Query 116954 GCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCC 117013 || || |||| || || || || || ||||||| || ||||| || | ||||| Sbjct 2212622 GCTATTGAGAACATCCCATGTATCCAAAAGAAGGCTGACTGGGCCTTGAGATGGATTAAT 2212563 Query 117014 GGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTC 117073 | || || || || ||| | |||| || ||||| ||||| || || ||||| Sbjct 2212562 GATGACGATGCATTGTTTGGTGAGAGATTGGTTGCTTTCGCAGCCGTTGAAGGTATCTTC 2212503 Query 117074 TTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTG 117133 ||| ||| ||||| | || || ||| | ||||| | ||| | ||||| || || Sbjct 2212502 TTTAGTGGCTCCTTCGCATCTATCTTCTGGTTGAAGAAGAGAGGCTTGATGCCTGGTTTG 2212443 Query 117134 ACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTG 117193 |||||| ||||||| | || | | | ||||| ||| |||| |||||||||||| ||| Sbjct 2212442 ACTTTCTCCAACGAGTTGATTTGCCGTGACGAAGGTTTGCACACCGACTTTGCCTGCTTG 2212383 Query 117194 CTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGG 117227 ||||| |||||||| | | |||| | | ||| Sbjct 2212382 TTGTTCTCGCATTTGGAGAACAGACCAAACTCGG 2212349 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || |||||||| ||||| || || || || || || |||||||| | || || || || Sbjct 171323 AAGATGCAAATTTTCGTTAAGACCCTAACTGGTAAGACCATCACTTTGGAGGTTGAGTCC 171264 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | | | |||| ||||| || || | ||||| ||||| ||||| | || Sbjct 171263 TCTGACACCATTGATAACG-TCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCAGA 171205 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || | || | || || || || |||| || | | ||| | ||||| Sbjct 171204 CCAGCAGAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTA 171145 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||| |||||| |||| |||| |||| ||| | ||||| || || Sbjct 171144 CAACATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTGAGAGGTGG 171094 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || | || || || || || ||| | || || || || | Sbjct 170864 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGTCCTCT 170805 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || || | ||||| ||||| ||||| | ||||| Sbjct 170804 GACACCATTGATAACG-TCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCA 170746 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | || | ||| || || || |||| || | | ||| | |||||||| Sbjct 170745 GCAGAGATTGATTTTCGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTACAA 170686 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||| |||||| |||| |||| |||| ||| | ||||| || || Sbjct 170685 CATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTGAGAGGTGG 170638 >seq17 Length=1373282 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || |||||||| ||||| || || | || || || |||||||| | || || || || Sbjct 1191625 AAGATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATCACTTTGGAGGTTGAGTCC 1191684 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | | | |||| ||||| || || | ||||| || || || || | || Sbjct 1191685 TCTGACACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAGGAAGGTATTCCACCAGA 1191743 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||||||| || | |||| ||| || || || |||| |||| | ||| | |||||| Sbjct 1191744 CCAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCCGACTA 1191803 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||| |||||| |||| | || | || ||| | ||||| || || Sbjct 1191804 CAACATCCAAAAGGAGTCCACCTTACACTTGGTTTTGAGATTGAGAGGTGG 1191854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219090515920