Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq11 93.3 4e-14 seq10 91.5 1e-13 seq17 89.7 4e-13 seq16 82.4 7e-11 >seq11 Length=2453602 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | ||||||||| || ||||| | || ||||| ||||| |||||||| || Sbjct 170408 TACCACCTCTTAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAG 170467 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || | |||||| | || || ||||| | || | | |||||| || || | Sbjct 170468 ACAAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGTG 170527 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || |||||||||||| || || || || | || | |||||| | | ||| | Sbjct 170528 GGATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAA 170587 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | ||| | || || || |||| ||| || || ||||| ||||| Sbjct 170588 CCTCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 170636 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||||| || ||||| | || ||||| ||||| |||||||| || Sbjct 170636 TACCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAG 170695 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || | |||||| | || || |||||| | || | | |||||| || || | Sbjct 170696 ACAAGGTTCTTCCATCCTCCAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTG 170755 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || |||||||||||| || || || || | || | |||||| | | ||| | Sbjct 170756 GGATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAA 170815 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | ||| | || || || |||| ||| || || ||||| ||||| Sbjct 170816 CCTCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 170864 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||||| || ||||| | || ||||| ||||| |||||||| || Sbjct 170864 TACCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAG 170923 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || | |||||| | || || ||||| | || | | |||||| || || | Sbjct 170924 ACAAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATTAATCTCTGCTGGTCTGGTG 170983 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || |||||||||||| || || || || | || | |||||| | | ||| | Sbjct 170984 GAATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAA 171043 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | ||| | || || || |||| ||| || || ||||||||||| Sbjct 171044 CCTCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 171092 Score = 84.2 bits (92), Expect = 2e-11 Identities = 173/254 (68%), Gaps = 4/254 (2%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||||| || ||||| | || ||||| ||||| |||||||| || Sbjct 171092 TACCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAG 171151 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || | |||||| | || || ||||| | || | | |||||| || || | Sbjct 171152 ACAAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGTG 171211 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || |||||||||||| || || || || | || | |||||| | | ||| | Sbjct 171212 GGATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAA 171271 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTAT-TCT 118748 |||| | || | || || || || || || || || ||||| ||||| ||||| | | Sbjct 171272 CCTCCAAAGTGATGGTCTTACCAGTTAGGGTCTTAACGAAAATTTGCAT--CTTATCTAT 171329 Query 118749 ATTACTCGTTTACT 118762 |||| | |||||| Sbjct 171330 ATTA-TACTTTACT 171342 >seq10 Length=3096056 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 118521 AATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGC 118580 |||||||| |||||||| | |||||||| ||||| || || || || || ||| | Sbjct 917540 AATCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATATTATAGTCAGACAAAGTTCTG 917599 Query 118581 GTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCC 118640 |||||| | || || ||||| | || | | || || || || || || |||||| Sbjct 917600 CCATCCTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATTCCCTCC 917659 Query 118641 TTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTC 118700 |||||| ||| || ||||| | |||| ||||| | ||| ||||| | ||| Sbjct 917660 TTGTCTTGAATCTTGGACTTAACATTGTCGATAGTGTCGGAAGACTCCACCTCCAAGGTG 917719 Query 118701 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || || || |||| ||||| |||||||| ||||| Sbjct 917720 ATAGTCTTACCTGTCAAGGTTTTAACAAAAATTTGCAT 917757 >seq17 Length=1373282 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||||| |||||||| | || ||||| ||||| |||||||| ||| Sbjct 1192312 TACCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCGG 1192253 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | || | || || | ||| || ||||| | || | | ||| || || || | Sbjct 1192252 ATAAGGTTCTACCGTCTTCCAACTGCTTACCAGCAAAAATTAATCTCTGTTGGTCTGGTG 1192193 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || |||||||||||| || || || || | || | |||||| | | ||| | Sbjct 1192192 GAATACCCTCCTTGTCTTGGATCTTAGACTTGACGTTGTCAATGGTGTCAGAGGACTCAA 1192133 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | ||| | || || ||||||| || || || ||||||||||| Sbjct 1192132 CCTCCAAGGTAATAGTCTTACCGGTCAAGGTCTTGACGAAAATCTGCAT 1192084 >seq16 Length=1434301 Score = 82.4 bits (90), Expect = 7e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 118521 AATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGC 118580 |||||||| |||||||| | || ||||| ||||| |||||||| || || || | Sbjct 509175 AATCTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTG 509116 Query 118581 GTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCC 118640 |||||| | || || ||||| | || | | ||| || || || || || |||||| Sbjct 509115 CCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGTTGGTCAGGTGGGATTCCCTCC 509056 Query 118641 TTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTC 118700 |||||| || || ||||| | |||| ||||| | ||| ||||| | ||| Sbjct 509055 TTGTCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCGGAAGACTCCACCTCCAAGGTG 508996 Query 118701 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || || || |||| || || || ||||| ||||| Sbjct 508995 ATAGTCTTACCTGTCAAGGTCTTAACGAAAATTTGCAT 508958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830310115764