Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16]
17 sequences; 21,255,474 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq10 116 6e-21
seq17 98.7 1e-15
seq16 89.7 8e-13
seq11 86.0 9e-12
>seq10
Length=3096056
Score = 116 bits (128), Expect = 6e-21
Identities = 108/137 (79%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || ||||| || || ||||| || || |||||||| || ||
Sbjct 917531 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATATTATAGTCAGAC 917590
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| |||||||| ||| || ||||| || |||||||||||||||||||| || || || |||
Sbjct 917591 AAAGTTCTGCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGA 917650
Query 146171 ATTCCTTCTTTATCTTG 146187
||||| || || |||||
Sbjct 917651 ATTCCCTCCTTGTCTTG 917667
>seq17
Length=1373282
Score = 98.7 bits (108), Expect = 1e-15
Identities = 153/227 (67%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | |||||| ||||| ||||| || |||||||| || || ||||| ||
Sbjct 1192082 CCACCTCTCAATCTTAAGACCAAGTGTAAGGTGGATTCTTTCTGAATGTTGTAATCGGAT 1192023
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||| | || || ||||| || ||||| || ||||||||||| || || || |||
Sbjct 1192022 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCTGGTGGA 1191963
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| || || || || || ||| || ||| ||| |||
Sbjct 1191962 ATACCCTCCTTGTCCTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGACT 1191903
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|||| || || || |||||||| || || || | ||| ||||||||
Sbjct 1191902 TCTAAAGTAATAGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 1191856
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || ||||| ||||| || || || || || || || || ||
Sbjct 1191854 CCACCTCTCAATCTCAAAACCAAGTGTAAGGTGGACTCCTTTTGGATGTTGTAGTCGGAT 1191795
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||| | || || ||||| || ||||| || |||||||||||||| || || |||
Sbjct 1191794 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGTGGA 1191735
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| || || ||
Sbjct 1191734 ATACCTTCCTTGTCCTG 1191718
>seq16
Length=1434301
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || ||||| || || || || || || || || || || ||
Sbjct 509184 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCAGAC 509125
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||||| ||| || ||||| || ||||||||||||||||| || || || || ||
Sbjct 509124 AAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGTTGGTCAGGTGGG 509065
Query 146171 ATTCCTTCTTTATCTTG 146187
||||| || || |||||
Sbjct 509064 ATTCCCTCCTTGTCTTG 509048
>seq11
Length=2453602
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || || || || ||||| || || || || || || || ||
Sbjct 170410 CCACCTCTTAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 170469
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||| | ||| || ||||| || ||||||||||||||||| ||||| || || ||
Sbjct 170470 AAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGTGGG 170529
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || |||||
Sbjct 170530 ATACCCTCCTTGTCTTG 170546
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || || || || ||||| || || || || || || || ||
Sbjct 170866 CCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 170925
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||| | ||| || ||||| || ||||||||||| ||||| ||||| || || |||
Sbjct 170926 AAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATTAATCTCTGCTGGTCTGGTGGA 170985
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || |||||
Sbjct 170986 ATACCCTCCTTGTCTTG 171002
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || || || || ||||| || || || || || || || ||
Sbjct 171094 CCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 171153
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||| | ||| || ||||| || ||||||||||||||||| ||||| || || ||
Sbjct 171154 AAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGTGGG 171213
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || |||||
Sbjct 171214 ATACCCTCCTTGTCTTG 171230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743526242000640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |