Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq11 223 3e-53 seq2 167 2e-36 >seq11 Length=2453602 Score = 223 bits (246), Expect = 3e-53 Identities = 582/880 (66%), Gaps = 21/880 (2%) Strand=Plus/Plus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 ||||| || ||||| ||||||||||||||||| ||||| || || | || || || ||| Sbjct 2212096 TTTTGGTAATCACTGACTCTCTTTTCAAAGAAGTTTGTCTTACCAGCCAACGAGATGTTT 2212155 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAAT--AGTATTTATCGCATCCCAATTCCAACA 16061 |||||||| ||||| || ||| | ||| | || || | | ||||| ||| | Sbjct 2212156 TCCATAAAGTCAAATGGGTTTGT--AACGTTGTAGACCTTCTTGTTACCCAAAGCCACTA 2212213 Query 16062 ATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTA 16121 | ||||| || ||||||||||| | ||| || ||| || | | ||||| || | | Sbjct 2212214 ACAATCTGTCAGCCACAAATTCAACATATTGACACATCAACTTTGAATTCATACCCAACA 2212273 Query 16122 ATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTA 16181 || ||| || | || || | || || | |||||| ||| ||| ||||| | || | Sbjct 2212274 ATGAAACTGGTAAAGCGTCACTGAAGAACTCTTTTTCGATAACAACAGCTTCTGTAATAA 2212333 Query 16182 TATCTCTTACTACACTATTTAACGGAG---GGTTTAAT----AAGTGTTTAAACATTATA 16234 | | ||| | || |||| | ||| ||| | | || || |||| | Sbjct 2212334 TCT-TCTCA----ACAATTT--CCGAGTTTGGTCTGTTCTCCAAATGCGAGAACAACAAG 2212386 Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294 || ||||| || ||||| |||||||| | | || |||||||| || || || | | Sbjct 2212387 CAGGCAAAGTCGGTGTGCAAACCTTCGTCACGGCAAATCAACTCGTTGGAGAAAGTCAAA 2212446 Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAAT 16354 || ||||| | |||| || || | ||| || |||| || || || ||| |||||| Sbjct 2212447 CCAGGCATCAAGCCTCTCTTCTTCAACCAGAAGATAGATGCGAAGGAGCCACTAAAGAAG 2212506 Query 16355 ATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttct 16414 ||||||||||| || || || |||||||||| |||||| || | || | | | Sbjct 2212507 ATACCTTCAACGGCTGCGAAAGCAACCAATCTCTCACCAAACAATGCATCGTCATCATTA 2212566 Query 16415 atccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTA 16474 |||||| | ||||| | || || | || | ||| |||||||| || |||||| Sbjct 2212567 ATCCATCTCAAGGCCCAGTCAGCCTTCTTTTGGATACATGGGATGTTCTCAATAGCATTA 2212626 Query 16475 AATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATT 16534 || ||| | | ||||| || ||| || ||||| || || || || || Sbjct 2212627 AACAAAAAGTCAGCCTCTTTAGGGTCCTTAATGTAGGTATCAATAAGCAATGAGTATGTT 2212686 Query 16535 TCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATT 16594 || || || || |||||||| || |||||||| || || || | ||||| | | | Sbjct 2212687 TCAGAGTGGATGTTCTCCATCATAATTTGAAAACCGTAGAAACACTTGGCTTCTGGCACT 2212746 Query 16595 TGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCA 16654 || || || | | | || | || | ||||| ||||| || || ||||| || ||| Sbjct 2212747 TGGACCTCGGCGGAGAAGTTCTCGACCAAGTTCTCGTTGACAATACCATCAGAGGCCGCA 2212806 Query 16655 AAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC-TGAAAGT--TTTAACCAG 16711 ||||| || | || | ||| ||| | ||||||| || | | | ||| |||| Sbjct 2212807 AAAAAAGCTAAGATACGAGAAATGAAAAATCTTTCGTTCTCATTCATCTTGTTTTGCCAG 2212866 Query 16712 TCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTT 16771 ||| || || |||||| | || || ||||||| |||||||| | |||||| Sbjct 2212867 TCATGGGTGTCCTTGCCTAAATCTATTTCCTCGGCAGTCCAGAAAGAAGCTTCTGCCTTT 2212926 Query 16772 TTATACATTTTCCATATGTCTTCGTAAACAATAGGAAACA 16811 |||||||||| ||| || || | ||| |||||||||| Sbjct 2212927 TTATACATTTGCCAGATCTCGTGGTATCTGATAGGAAACA 2212966 >seq2 Length=1085221 Score = 167 bits (184), Expect = 2e-36 Identities = 465/708 (66%), Gaps = 14/708 (2%) Strand=Plus/Minus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 ||||| || ||||| ||||||||||| ||||| ||||| || || | || || || ||| Sbjct 237813 TTTTGGTAGTCACTGACTCTCTTTTCGAAGAAGTTTGTCTTACCAGCCAACGAGATGTTT 237754 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAAT--AGTATTTATCGCATCCCAATTCCAACA 16061 |||||||| ||||| || ||| | ||| | || || | | ||||| | | || Sbjct 237753 TCCATAAAGTCAAATGGGTTTGT--AACGTTGTAGACCTTCTTGTTACCCAAAGCAACCA 237696 Query 16062 ATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTA 16121 | ||||| || || || ||||| | ||| || |||||| | |||||| || | | Sbjct 237695 ACAATCTGTCAGCTACGAATTCGACATATTGGCACATTAACTTTGCGTTCATACCCAACA 237636 Query 16122 ATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTA 16181 || ||| || | || || || || || | ||| || || ||| ||||| |||| | Sbjct 237635 ATGAAACGGGTAAAGCGTCAGTGAAGAACTCTTTCTCGATGCCAACAGCTTCTGTGATGA 237576 Query 16182 TATCTCTTACTACACTATTTAACGGAG-GGTTTAAT----AAGTGTTTAAACATTATACA 16236 | | || | ||| |||| | || ||| | | ||||| |||| | ||| Sbjct 237575 TCT---TTTCAACA--ATTTCAGGGTTTGGTCTGTTCTCCAAGTGCGAGAACAACAAACA 237521 Query 16237 AGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACC 16296 || || || ||||| |||||||| | | || |||||||| || || || | ||| Sbjct 237520 GGCGAAGTCGGTGTGCAAACCTTCGTCACGGCAGATCAACTCGTTAGAGAAGGTCAAACC 237461 Query 16297 TGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATAT 16356 ||||| | |||| || || | ||| || |||| || || |||||| ||||| || Sbjct 237460 AGGCATCAAGCCTCTCTTCTTCAACCAGAAGATAGATGCGAAGGAACCACTGAAGAAGAT 237401 Query 16357 ACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctat 16416 ||||||||| || || || |||||||||| ||||||| || | || | | | || Sbjct 237400 ACCTTCAACAGCCGCGAAAGCAACCAATCTCTCACCGAACAATGCATCGTCATCGTTGAT 237341 Query 16417 ccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAA 16476 |||| | ||||| | || || | || || || |||||||| || || ||||| Sbjct 237340 CCATCTCAAGGCCCAGTCAGCCTTCTTTTGAATGCATGGGATGTTCTCGATGGCGTTAAA 237281 Query 16477 TAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTC 16536 ||| | | || || || ||| || || || || || || || | || Sbjct 237280 CAAAAAGTCGGCCTCCTTAGGGTCCTTAATGTAGGTGTCAATAAGCAATGAGTATGTCTC 237221 Query 16537 TGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTG 16596 || || ||||||||||| ||||| ||||| || || || | ||||| | | ||| Sbjct 237220 AGAGTGGATATTCTCCATCATAATCTGGAAACCGTAGAAACACTTGGCTTCTGGGACTTG 237161 Query 16597 TACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATC 16644 || |||| | | || | || | ||||| || || || || ||||| Sbjct 237160 GACCTCAGCGGAGAAGTTCTCGACCAAGTTCTCATTGACAATACCATC 237113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511901716200