Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 seq11 91.5 1e-13 >seq2 Length=1085221 Score = 107 bits (118), Expect = 2e-18 Identities = 219/320 (68%), Gaps = 9/320 (3%) Strand=Plus/Plus Query 52726 AACGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCGTGTTTGTATTATAAT 52785 ||||||||||| | || |||||||| ||||||| || || || ||||||| | | | Sbjct 237476 AACGAGTTGATCTGCCGTGACGAAGGTTTGCACACCGACTTCGCCTGTTTGT--TGTTCT 237533 Query 52786 ACGCGCGTTAAAGAAAAATTGTCATA---TGAAAAAATTCTAGACATGTTTAAAGAGGCC 52842 ||| | || |||| | || | ||||| || | | || | | ||| || Sbjct 237534 -CGCAC-TTGGAGAACAGAC--CAAACCCTGAAATTGTTGAAAAGATCATCACAGAAGCT 237589 Query 52843 GTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGCATGAAC 52902 || | ||| || |||||||| || || |||||||||||||| ||||||||||| |||||| Sbjct 237590 GTTGGCATCGAGAAAGAGTTCTTCACTGACGCTTTACCCGTTTCATTGTTGGGTATGAAC 237649 Query 52903 GCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAGCTCGGT 52962 || | | |||||| | || |||| || || || |||||| ||||| | | ||| Sbjct 237650 GCAAAGTTAATGTGCCAATATGTCGAATTCGTAGCTGACAGATTGTTGGTTGCTTTGGGT 237709 Query 52963 CAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCGCTCGAG 53022 | ||| ||| || | ||||| ||| |||||| | ||||| ||| | | Sbjct 237710 AACAAGAAGGTCTACAACGTTACAAACCCATTTGACTTTATGGAAAACATCTCGTTGGCT 237769 Query 53023 GGCAAAACAAACTTTTTCGA 53042 || || |||||||| ||||| Sbjct 237770 GGTAAGACAAACTTCTTCGA 237789 >seq11 Length=2453602 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | |||||||||||| | || ||||| ||||| ||||| || || | Sbjct 170410 CCACCTCTTAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 170469 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || || || | || ||||||||| | |||| | ||||| || || || Sbjct 170470 AAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGTGGG 170529 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || || ||||| ||| || || | | || | ||||| | || ||| ||| Sbjct 170530 ATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACC 170589 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | ||| | ||||| || ||||| || || ||||| ||||||||| Sbjct 170590 TCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCATA 170637 Score = 84.2 bits (92), Expect = 2e-11 Identities = 228/347 (66%), Gaps = 9/347 (3%) Strand=Plus/Minus Query 52699 GGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATATCGCGCGACGAAGGAATGCAC 52758 ||| | ||||| || | || || |||||||||||| | || |||||||| ||||| Sbjct 2212460 GGCTTGATGCCTGGTTTGACTTTCTCCAACGAGTTGATTTGCCGTGACGAAGGTTTGCAC 2212401 Query 52759 ACAGATTTTGCGTGTTTGTATTATAATACGCGCGTTAAAGAAAAATTGTCATATGAAAAA 52818 || || ||||| || |||| | | ||| || || || || | || Sbjct 2212400 ACCGACTTTGCCTGCTTGTTGTT-----CTCGCATTTG-GAGAACAGACCAAACTCGGAA 2212347 Query 52819 ATTCTAGACATGTTTAA---AGAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCT 52875 ||| | || | | ||| ||| || || | || ||||||||||| || | |||||| Sbjct 2212346 ATTGTTGAGAAGATTATTACAGAAGCTGTTGTTATCGAAAAAGAGTTCTTCAGTGACGCT 2212287 Query 52876 TTACCCGTATCATTGTTGGGCATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTT 52935 ||||| || ||||||||||| ||||| | | ||||||| | || | || ||||| Sbjct 2212286 TTACCAGTTTCATTGTTGGGTATGAATTCAAAGTTGATGTGTCAATATGTTGAATTTGTG 2212227 Query 52936 GCGGACAGACTGTTGATGCAGCTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTT 52995 || |||||| |||| || | ||| | ||| ||| || | ||||| ||| Sbjct 2212226 GCTGACAGATTGTTAGTGGCTTTGGGTAACAAGAAGGTCTACAACGTTACAAACCCATTT 2212167 Query 52996 TCGTTTATGAACAACATATCGCTCGAGGGCAAAACAAACTTTTTCGA 53042 |||||| | ||||| ||| | | || || |||||||| || || Sbjct 2212166 GACTTTATGGAAAACATCTCGTTGGCTGGTAAGACAAACTTCTTTGA 2212120 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | |||||||||||| | || ||||| ||||| ||||| || || | Sbjct 170638 CCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 170697 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || || || | || |||||||| | |||| | ||||| || || || Sbjct 170698 AAGGTTCTTCCATCCTCCAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGG 170757 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || || ||||| ||| || || | | || | ||||| | || ||| ||| Sbjct 170758 ATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACC 170817 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | ||| | ||||| || ||||| || || ||||| ||||||||| Sbjct 170818 TCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCATA 170865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063894586400