Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16]
17 sequences; 21,255,474 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq2 107 2e-18
seq11 91.5 1e-13
>seq2
Length=1085221
Score = 107 bits (118), Expect = 2e-18
Identities = 219/320 (68%), Gaps = 9/320 (3%)
Strand=Plus/Plus
Query 52726 AACGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCGTGTTTGTATTATAAT 52785
||||||||||| | || |||||||| ||||||| || || || ||||||| | | |
Sbjct 237476 AACGAGTTGATCTGCCGTGACGAAGGTTTGCACACCGACTTCGCCTGTTTGT--TGTTCT 237533
Query 52786 ACGCGCGTTAAAGAAAAATTGTCATA---TGAAAAAATTCTAGACATGTTTAAAGAGGCC 52842
||| | || |||| | || | ||||| || | | || | | ||| ||
Sbjct 237534 -CGCAC-TTGGAGAACAGAC--CAAACCCTGAAATTGTTGAAAAGATCATCACAGAAGCT 237589
Query 52843 GTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGCATGAAC 52902
|| | ||| || |||||||| || || |||||||||||||| ||||||||||| ||||||
Sbjct 237590 GTTGGCATCGAGAAAGAGTTCTTCACTGACGCTTTACCCGTTTCATTGTTGGGTATGAAC 237649
Query 52903 GCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAGCTCGGT 52962
|| | | |||||| | || |||| || || || |||||| ||||| | | |||
Sbjct 237650 GCAAAGTTAATGTGCCAATATGTCGAATTCGTAGCTGACAGATTGTTGGTTGCTTTGGGT 237709
Query 52963 CAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCGCTCGAG 53022
| ||| ||| || | ||||| ||| |||||| | ||||| ||| | |
Sbjct 237710 AACAAGAAGGTCTACAACGTTACAAACCCATTTGACTTTATGGAAAACATCTCGTTGGCT 237769
Query 53023 GGCAAAACAAACTTTTTCGA 53042
|| || |||||||| |||||
Sbjct 237770 GGTAAGACAAACTTCTTCGA 237789
>seq11
Length=2453602
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| ||| | |||||||||||| | || ||||| ||||| ||||| || || |
Sbjct 170410 CCACCTCTTAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 170469
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || || || | || ||||||||| | |||| | ||||| || || ||
Sbjct 170470 AAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGTGGG 170529
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| || || ||||| ||| || || | | || | ||||| | || ||| |||
Sbjct 170530 ATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACC 170589
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | ||| | ||||| || ||||| || || ||||| |||||||||
Sbjct 170590 TCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCATA 170637
Score = 84.2 bits (92), Expect = 2e-11
Identities = 228/347 (66%), Gaps = 9/347 (3%)
Strand=Plus/Minus
Query 52699 GGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATATCGCGCGACGAAGGAATGCAC 52758
||| | ||||| || | || || |||||||||||| | || |||||||| |||||
Sbjct 2212460 GGCTTGATGCCTGGTTTGACTTTCTCCAACGAGTTGATTTGCCGTGACGAAGGTTTGCAC 2212401
Query 52759 ACAGATTTTGCGTGTTTGTATTATAATACGCGCGTTAAAGAAAAATTGTCATATGAAAAA 52818
|| || ||||| || |||| | | ||| || || || || | ||
Sbjct 2212400 ACCGACTTTGCCTGCTTGTTGTT-----CTCGCATTTG-GAGAACAGACCAAACTCGGAA 2212347
Query 52819 ATTCTAGACATGTTTAA---AGAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCT 52875
||| | || | | ||| ||| || || | || ||||||||||| || | ||||||
Sbjct 2212346 ATTGTTGAGAAGATTATTACAGAAGCTGTTGTTATCGAAAAAGAGTTCTTCAGTGACGCT 2212287
Query 52876 TTACCCGTATCATTGTTGGGCATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTT 52935
||||| || ||||||||||| ||||| | | ||||||| | || | || |||||
Sbjct 2212286 TTACCAGTTTCATTGTTGGGTATGAATTCAAAGTTGATGTGTCAATATGTTGAATTTGTG 2212227
Query 52936 GCGGACAGACTGTTGATGCAGCTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTT 52995
|| |||||| |||| || | ||| | ||| ||| || | ||||| |||
Sbjct 2212226 GCTGACAGATTGTTAGTGGCTTTGGGTAACAAGAAGGTCTACAACGTTACAAACCCATTT 2212167
Query 52996 TCGTTTATGAACAACATATCGCTCGAGGGCAAAACAAACTTTTTCGA 53042
|||||| | ||||| ||| | | || || |||||||| || ||
Sbjct 2212166 GACTTTATGGAAAACATCTCGTTGGCTGGTAAGACAAACTTCTTTGA 2212120
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || | |||||||||||| | || ||||| ||||| ||||| || || |
Sbjct 170638 CCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 170697
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || || || | || |||||||| | |||| | ||||| || || ||
Sbjct 170698 AAGGTTCTTCCATCCTCCAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGG 170757
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| || || ||||| ||| || || | | || | ||||| | || ||| |||
Sbjct 170758 ATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACC 170817
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | ||| | ||||| || ||||| || || ||||| |||||||||
Sbjct 170818 TCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCATA 170865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063894586400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |