Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq11 206 3e-48 seq2 125 7e-24 >seq11 Length=2453602 Score = 206 bits (228), Expect = 3e-48 Identities = 582/884 (66%), Gaps = 15/884 (2%) Strand=Plus/Plus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 ||||| || ||||| ||||| |||||||| ||||| || ||||| ||| || || ||| Sbjct 2212096 TTTTGGTAATCACTGACTCTCTTTTCAAAGAAGTTTGTCTTACCAGCCAACGAGATGTTT 2212155 Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAAT 13488 |||||||| || ||||| ||||| | | || || | ||| | | | ||| Sbjct 2212156 TCCATAAAGTCAAATGGGTTTGTAACGTTGTAGACCTTCTTGTTACCCAAAGCCACTAAC 2212215 Query 13489 AATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 13548 ||||| ||||| | ||| |||| ||||||| |||| || | |||||||||| | | | Sbjct 2212216 AATCTGTCAGCCACAAATTCAACATATTGACACATCAACTTTGAATTCATACCCAACAAT 2212275 Query 13549 TTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATA 13608 || || | | | | || || |||||||| ||| ||||| || | ||||| Sbjct 2212276 GAAACTGGTAAAGCGTCACTGAAGAACTCTTTTTCGATAACAACAGCTTCTGTAATAATC 2212335 Query 13609 ATCTTAATAATGTCATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACACGCAA 13666 ||| || ||| || || | | | || | | ||| || | || || |||| Sbjct 2212336 TTCTCAACAATTTCCG-AGTTTG-GTCTGTTCTCCAAATGCGAGAACAACAAGCAGGCAA 2212393 Query 13667 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 13726 | || || | || || || | | ||| | ||||| || || || || || |||| Sbjct 2212394 AGTCGGTGTGCAAACCTTCGTCACGGCAAATCAACTCGTTGGAGAAAGTCAAACCAGGCA 2212453 Query 13727 TCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCT 13786 |||| |||| || || ||||| || || | ||||| || || |||||| || || | Sbjct 2212454 TCAAGCCTCTCTTCTTCAACCAGAAGATAGATGCGAAGGAGCCACTAAAGAAGATACCTT 2212513 Query 13787 CAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATT 13846 |||| || || || || | | || || |||||| |||| | | | |||||| Sbjct 2212514 CAACGGCTGCGAAAGCAACCAATCTCTCACCAAACAATGCATCGTCATCATTAATCCATC 2212573 Query 13847 TTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAAT 13906 | ||||| |||| || |||| ||| | || | || || ||||| || ||| Sbjct 2212574 TCAAGGCCCAGTCAGCCTTCTTTTGGATACATGGGATGTTCTCAATAGCATTAAACAAAA 2212633 Query 13907 GTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGA 13964 || |||||||| | ||| |||||| ||||||||||| || || ||||||| Sbjct 2212634 AGTCAGCCTCTTTAGGGTCCTT--AATGTAGGTATCAATAAGCAATGAGTATGTTTCAGA 2212691 Query 13965 GTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTAC 14024 ||| ||||| || || || |||||||| || ||||| | ||||||| | ||| || Sbjct 2212692 GTGGATGTTCTCCATCATAATTTGAAAACCGTAGAAACACTTGGCTTCTGGCACTTGGAC 2212751 Query 14025 CTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAA 14084 ||| | | | || | || ||||||| || || |||||||||||| || |||||||| Sbjct 2212752 CTCGGCGGAGAAGTTCTCGACCAAGTTCTCGTTGACAATACCATCAGAGGCCGCAAAAAA 2212811 Query 14085 TGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGTTGAGTTTTTTCCAATC--G 14139 || || || ||| ||| | || | | ||||| | |||| ||| || | Sbjct 2212812 AGCTAAGATACGAGAAATGAAAAATCTTTCGTTCTCATTCATCTTGTTTTGCCAGTCATG 2212871 Query 14140 GCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTA 14199 | | ||||| | ||||| ||| || | ||||| ||| ||| | || |||||| Sbjct 2212872 GGT--GTCCTTGCCTAAATCTATTTCCTCGGCAGTCCAGAAAGAAGCTTCTGCCTTTTTA 2212929 Query 14200 TACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAA 14243 |||||| ||| || || | ||| |||||||| | ||||| Sbjct 2212930 TACATTTGCCAGATCTCGTGGTATCTGATAGGAAACAACACAAA 2212973 >seq2 Length=1085221 Score = 125 bits (138), Expect = 7e-24 Identities = 471/732 (64%), Gaps = 14/732 (2%) Strand=Plus/Minus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 ||||| || ||||| ||||| ||||| || ||||| || ||||| ||| || || ||| Sbjct 237813 TTTTGGTAGTCACTGACTCTCTTTTCGAAGAAGTTTGTCTTACCAGCCAACGAGATGTTT 237754 Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAAT 13488 |||||||| || ||||| ||||| | | || || | ||| | | | || Sbjct 237753 TCCATAAAGTCAAATGGGTTTGTAACGTTGTAGACCTTCTTGTTACCCAAAGCAACCAAC 237694 Query 13489 AATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 13548 ||||| ||||| | || || | |||||| ||||||| | |||||||| | | | Sbjct 237693 AATCTGTCAGCTACGAATTCGACATATTGGCACATTAACTTTGCGTTCATACCCAACAAT 237634 Query 13549 TTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATA 13608 || || | | ||| || || ||||| || || ||||| || | || || Sbjct 237633 GAAACGGGTAAAGCGTCAGTGAAGAACTCTTTCTCGATGCCAACAGCTTCTGTGATGATC 237574 Query 13609 ATCTTAATAATGTCA---TTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCA 13665 | | || ||| ||| || | | | | | || || || | ||||| || Sbjct 237573 TTTTCAACAATTTCAGGGTTTG--GTCTGTTCTCCAAG-TGCGAGAACAACAAACAGGCG 237517 Query 13666 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 13725 || || || | || || || | | || | ||||| || || || || || ||| Sbjct 237516 AAGTCGGTGTGCAAACCTTCGTCACGGCAGATCAACTCGTTAGAGAAGGTCAAACCAGGC 237457 Query 13726 ATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCC 13785 ||||| |||| || || ||||| || || | ||||| || || ||||| || || Sbjct 237456 ATCAAGCCTCTCTTCTTCAACCAGAAGATAGATGCGAAGGAACCACTGAAGAAGATACCT 237397 Query 13786 TCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT--TTGATATCC 13843 ||||| || || || || | | || || || ||| |||| | | | ||||| || Sbjct 237396 TCAACAGCCGCGAAAGCAACCAATCTCTCACCGAACAATGCATCGTCATCGTTGAT--CC 237339 Query 13844 ATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATA 13903 || | ||||| |||| || |||| ||| | || | ||||| || || || | Sbjct 237338 ATCTCAAGGCCCAGTCAGCCTTCTTTTGAATGCATGGGATGTTCTCGATGGCGTTAAACA 237279 Query 13904 AATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 13961 || || ||| |||| | ||| |||||| || |||||||| || || | || Sbjct 237278 AAAAGTCGGCCTCCTTAGGGTCCTT--AATGTAGGTGTCAATAAGCAATGAGTATGTCTC 237221 Query 13962 AGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTG 14021 |||||| || || || || ||||| ||||| || ||||| | ||||||| ||| Sbjct 237220 AGAGTGGATATTCTCCATCATAATCTGGAAACCGTAGAAACACTTGGCTTCTGGGACTTG 237161 Query 14022 TACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAA 14081 ||||| | | | || | || ||||||| ||||| |||||||||||| || || || Sbjct 237160 GACCTCAGCGGAGAAGTTCTCGACCAAGTTCTCATTGACAATACCATCAGAGGCAGCGAA 237101 Query 14082 AAATGCCAATAT 14093 || ||||| || Sbjct 237100 GAAAGCCAAGAT 237089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588698299880