Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq11 93.3 3e-14 seq17 89.7 4e-13 seq16 86.0 5e-12 seq10 82.4 6e-11 >seq11 Length=2453602 Score = 93.3 bits (102), Expect = 3e-14 Identities = 165/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || | || ||| || || || || | |||| ||||||||| | ||||| || ||| Sbjct 171094 CCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 171153 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || | | | || |||||||| || || ||||||||||||| ||| || || | || Sbjct 171154 AAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGTGGG 171213 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||| || || || |||| ||||| | ||| ||||| | ||| || Sbjct 171214 ATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACC 171273 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTTCTTAATTTTA 43122 || | || || || || || ||||| || || || ||||||||||| || | || ||| Sbjct 171274 TCCAAAGTGATGGTCTTACCAGTTAGGGTCTTAACGAAAATTTGCATCTTATCTATATTA 171333 Query 43123 T 43123 | Sbjct 171334 T 171334 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42894 TCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTC 42953 ||| || || || || | |||| ||||||||| | ||||| || ||||| || | | | Sbjct 170421 TCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCC 170480 Query 42954 GTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTT 43013 || |||||||| || || ||||||||||||| ||| || || | || | ||| || || Sbjct 170481 ATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGTGGGATACCCTCCTT 170540 Query 43014 TTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTAT 43073 || |||| ||||| | ||| ||||| | ||| || || | || || Sbjct 170541 GTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACCTCCAAGGTAAT 170600 Query 43074 AGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || || || | ||| || || ||||||||||| Sbjct 170601 TGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 170636 >seq17 Length=1373282 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || | || |||||| ||||| || | ||| || || || | ||||||||||| Sbjct 1192082 CCACCTCTCAATCTTAAGACCAAGTGTAAGGTGGATTCTTTCTGAATGTTGTAATCGGAT 1192023 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || | |||| |||||||| || || || || ||||||| ||||| || | || Sbjct 1192022 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCTGGTGGA 1191963 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||| || || || |||| ||||| || ||| ||||| || ||||| Sbjct 1191962 ATACCCTCCTTGTCCTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGACT 1191903 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| || ||||| || || || | ||| || || ||||||||||| Sbjct 1191902 TCTAAAGTAATAGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 1191856 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || | || ||| || ||||| || | ||| ||||||||| | ||||| ||||| Sbjct 1191854 CCACCTCTCAATCTCAAAACCAAGTGTAAGGTGGACTCCTTTTGGATGTTGTAGTCGGAT 1191795 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || | |||| |||||||| || || || || ||||||| || || || | || Sbjct 1191794 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGTGGA 1191735 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||| || || |||| ||||| || ||| ||||| | ||| || Sbjct 1191734 ATACCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCAACC 1191675 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112 || | || || || || || |||| || || || ||||||||||| || Sbjct 1191674 TCCAAAGTGATGGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCATCTT 1191625 >seq16 Length=1434301 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || | || ||| || ||||| || | ||| ||||||||| | ||||| || ||| Sbjct 509184 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCAGAC 509125 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || | | || |||||||| || || ||||||||||||| |||||| || | || Sbjct 509124 AAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGTTGGTCAGGTGGG 509065 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | || || || || |||| || || || | | |||||| || ||| || Sbjct 509064 ATTCCCTCCTTGTCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCGGAAGACTCCACC 509005 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112 || | || ||||| || || || | || || || ||||||||||| || Sbjct 509004 TCCAAGGTGATAGTCTTACCTGTCAAGGTCTTAACGAAAATTTGCATCTT 508955 >seq10 Length=3096056 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || | || ||| || ||||| || | || ||||||||| | ||| || || ||| Sbjct 917531 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATATTATAGTCAGAC 917590 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || | | || |||||||| || || ||||||||||||| ||||| || | || Sbjct 917591 AAAGTTCTGCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGA 917650 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | || || || || ||| || || || | | |||||| || ||| || Sbjct 917651 ATTCCCTCCTTGTCTTGAATCTTGGACTTAACATTGTCGATAGTGTCGGAAGACTCCACC 917710 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112 || | || ||||| || || || | ||||| |||||||||||||| || Sbjct 917711 TCCAAGGTGATAGTCTTACCTGTCAAGGTTTTAACAAAAATTTGCATCTT 917760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381369520984986