Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq2 145 8e-30 seq11 132 5e-26 seq17 82.4 8e-11 >seq2 Length=1085221 Score = 145 bits (160), Expect = 8e-30 Identities = 250/358 (70%), Gaps = 25/358 (7%) Strand=Plus/Plus Query 50493 AGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCA 50552 |||| | ||||| || | || || ||||||||||| | || |||||||| |||| Sbjct 237448 AGGCTTGATGCCTGGTTTGACCTTCTCTAACGAGTTGATCTGCCGTGACGAAGGTTTGCA 237507 Query 50553 CACAGACTTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATTATCATACGAAAC 50612 ||| ||||| || ||||||| | | || | || | || || || |||| Sbjct 237508 CACCGACTTCGCCTGTTTGTTGTTCT-------CGCACTTGGAGAA----CAGACCAAAC 237556 Query 50613 -----AATTTTGGACATGTTCAA---AGAAGCCGTCGACATCGAAAAAGAGTTTTTCACG 50664 |||| | || | | ||| |||||| || | |||||| |||||||| ||||| Sbjct 237557 CCTGAAATTGTTGAAAAGATCATCACAGAAGCTGTTGGCATCGAGAAAGAGTTCTTCACT 237616 Query 50665 GACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAG 50724 |||||||||||||| |||||||||| ||||||||| | | |||||| | || | || Sbjct 237617 GACGCTTTACCCGTTTCATTGTTGGGTATGAACGCAAAGTTAATGTGCCAATATGTCGAA 237676 Query 50725 TTTGTTGCAGACAGATTGTT-GTTGCAGCTGGG--ACAACCGAAATACTATAATGCACGT 50781 || || || ||||||||||| ||||| |||| |||| ||| ||| || | Sbjct 237677 TTCGTAGCTGACAGATTGTTGGTTGC-TTTGGGTAACAA--GAAGGTCTACAACGTTACA 237733 Query 50782 AACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAA 50839 ||||| ||| |||||| | ||||| ||||||| || || |||||||| ||||||| Sbjct 237734 AACCCATTTGACTTTATGGAAAACATCTCGTTGGCTGGTAAGACAAACTTCTTCGAAA 237791 >seq11 Length=2453602 Score = 132 bits (146), Expect = 5e-26 Identities = 245/357 (69%), Gaps = 23/357 (6%) Strand=Plus/Minus Query 50493 AGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCA 50552 |||| | ||||| || | || || |||||||||||||| || |||||||| |||| Sbjct 2212461 AGGCTTGATGCCTGGTTTGACTTTCTCCAACGAGTTGATTTGCCGTGACGAAGGTTTGCA 2212402 Query 50553 CACAGACTTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATTATCATACGAAAC 50612 ||| |||||||| || |||| | | || | || | || || || |||| Sbjct 2212401 CACCGACTTTGCCTGCTTGTTGTTCT-------CGCATTTGGAGAA----CAGACCAAAC 2212353 Query 50613 -----AATTTTGGACATGTTCAA---AGAAGCCGTCGACATCGAAAAAGAGTTTTTCACG 50664 |||| | || | | | | |||||| || | |||||||||||||| |||| Sbjct 2212352 TCGGAAATTGTTGAGAAGATTATTACAGAAGCTGTTGTTATCGAAAAAGAGTTCTTCAGT 2212293 Query 50665 GACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAG 50724 ||||||||||| || |||||||||| ||||| || | ||||||| | || |||| Sbjct 2212292 GACGCTTTACCAGTTTCATTGTTGGGTATGAATTCAAAGTTGATGTGTCAATATGTTGAA 2212233 Query 50725 TTTGTTGCAGACAGATTGTTGTTGCAGCTGGG--ACAACCGAAATACTATAATGCACGTA 50782 ||||| || ||||||||||| || |||| |||| ||| ||| || | | Sbjct 2212232 TTTGTGGCTGACAGATTGTTAGTGGCTTTGGGTAACAA--GAAGGTCTACAACGTTACAA 2212175 Query 50783 ACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAA 50839 |||| ||| |||||| | ||||| ||||||| || || |||||||| || |||| Sbjct 2212174 ACCCATTTGACTTTATGGAAAACATCTCGTTGGCTGGTAAGACAAACTTCTTTGAAA 2212118 >seq17 Length=1373282 Score = 82.4 bits (90), Expect = 8e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || |||||||| || |||||||||||| | || || |||||| | ||| |||||| Sbjct 1192052 GTGGATTCTTTCTGAATGTTGTAATCGGATAAGGTTCTACCGTCTTCCAATTGCTTACCA 1191993 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 || |||||| | ||| || || || || || || || ||||| || || || Sbjct 1191992 GCGAAGATCAATCTTTGTTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTAGACTTG 1191933 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | ||||| | | ||| ||||| | ||| | ||||| || ||||| || Sbjct 1191932 ACATTGTCAATAGTGTCAGAAGATTCGACTTCTAAAGTAATAGTCTTACCTGTCAAAGTC 1191873 Query 143168 TTTACGAATATTTGCATA 143185 || ||||| ||||||||| Sbjct 1191872 TTGACGAAAATTTGCATA 1191855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507014292259440