Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq11 95.1 8e-15 seq10 86.0 4e-12 seq17 84.2 1e-11 >seq11 Length=2453602 Score = 95.1 bits (104), Expect = 8e-15 Identities = 166/241 (69%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 33131 ATCCAATCT--TCACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTA 33188 ||||||| | | ||| |||||||| | ||| || || ||||| || ||||| ||||| | Sbjct 170396 ATCCAATTTAGTTACCACCTCTTAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGA 170455 Query 33189 TATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTT 33248 | ||||| |||||||| | | || ||||||||||| ||| ||| || || | | Sbjct 170456 TGTTGTAGTCAGACAAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCT 170515 Query 33249 GCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGT 33308 ||||||| | || || || || || || ||| || || | | ||| |||| Sbjct 170516 GCTGGTCTGGTGGGATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGT 170575 Query 33309 CGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCA 33368 | || | ||| |||| || || || || || || | ||| || ||||||||||||| Sbjct 170576 CAGAGGACTCAACCTCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCA 170635 Query 33369 T 33369 | Sbjct 170636 T 170636 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| || | ||| || || ||||| || ||||| ||||| || ||||| ||||| Sbjct 171093 ACCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGA 171152 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | | || ||||||||||| ||| ||| || || | |||||||| | || Sbjct 171153 CAAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGTGG 171212 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || || || || || ||| || || | | ||| ||||| || | ||| Sbjct 171213 GATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAAC 171272 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372 |||| ||| || || || || || || || || |||||||||||||| || Sbjct 171273 CTCCAAAGTGATGGTCTTACCAGTTAGGGTCTTAACGAAAATTTGCATCTT 171323 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| || | ||| || || ||||| || ||||| ||||| || ||||| ||||| Sbjct 170865 ACCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGA 170924 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | | || ||||||||||| ||| ||| ||||| | |||||||| | || Sbjct 170925 CAAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATTAATCTCTGCTGGTCTGGTGG 170984 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || || || || || ||| || || | | ||| ||||| || | ||| Sbjct 170985 AATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAAC 171044 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 |||| || || || || || || | ||| || |||||||| ||||| Sbjct 171045 CTCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 171092 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| || | ||| || || ||||| || ||||| ||||| || ||||| ||||| Sbjct 170637 ACCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGA 170696 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | | || ||||||||||| ||| || || || | |||||||| | || Sbjct 170697 CAAGGTTCTTCCATCCTCCAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGG 170756 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || || || || || ||| || || | | ||| ||||| || | ||| Sbjct 170757 GATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAAC 170816 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 |||| || || || || || || | ||| || |||||||||||||| Sbjct 170817 CTCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 170864 >seq10 Length=3096056 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 33141 CACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAG 33200 |||| ||||| || | ||| ||||| ||||| || ||||| ||||| ||||| || |||| Sbjct 917529 CACCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATATTATAGTCAG 917588 Query 33201 ACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGG 33260 ||||| | || ||||||||||| ||| ||| || || | ||| ||||| | | Sbjct 917589 ACAAAGTTCTGCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTG 917648 Query 33261 GTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAA 33320 | || || || || || |||| || || | | || |||||| | | | Sbjct 917649 GAATTCCCTCCTTGTCTTGAATCTTGGACTTAACATTGTCGATAGTGTCGGAAGACTCCA 917708 Query 33321 CGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372 | |||| || || || || || || | ||||| || ||||||||||| || Sbjct 917709 CCTCCAAGGTGATAGTCTTACCTGTCAAGGTTTTAACAAAAATTTGCATCTT 917760 >seq17 Length=1373282 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| || | ||| ||||| || || || ||||| ||||| || ||||| || || Sbjct 1191855 ACCACCTCTCAATCTCAAAACCAAGTGTAAGGTGGACTCCTTTTGGATGTTGTAGTCGGA 1191796 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 || | ||| ||||||||||| ||| || || || | ||||||||| | || Sbjct 1191795 TAAGGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGTGG 1191736 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || ||||| || || ||| || || | | ||| ||||| || | ||| Sbjct 1191735 AATACCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCAAC 1191676 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372 |||| ||| || || || || || | || || |||||||||||||| || Sbjct 1191675 CTCCAAAGTGATGGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCATCTT 1191625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318777533953266