Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16]
17 sequences; 21,255,474 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq17 96.9 2e-15
seq11 87.8 1e-12
seq10 86.0 4e-12
>seq17
Length=1373282
Score = 96.9 bits (106), Expect = 2e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||| |||||||||||||| ||||| |||| ||| ||||| ||||| || ||||||
Sbjct 1192083 ACCACCTCTCAATCTTAAGACCAAGTGTAAGGTGGATTCTTTCTGAATGTTGTAATCGGA 1192024
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
||| | | || |||||||| || || || || ||||| | ||| ||||| | ||
Sbjct 1192023 TAAGGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCTGGTGG 1191964
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| ||| || || || || || ||||| | ||| ||| || | | || ||
Sbjct 1191963 AATACCCTCCTTGTCCTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGAC 1191904
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | ||||| || ||||| || |||||||| || || ||||||||
Sbjct 1191903 TTCTAAAGTAATAGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 1191856
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||| ||||||||||| || ||||| |||| ||| ||| ||||| || || || |||
Sbjct 1191855 ACCACCTCTCAATCTCAAAACCAAGTGTAAGGTGGACTCCTTTTGGATGTTGTAGTCGGA 1191796
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
||| | | || |||||||| || || || || ||||| | ||||||||| | ||
Sbjct 1191795 TAAGGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGTGG 1191736
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| |||||| || || || || ||||| | ||| || || | | ||| ||
Sbjct 1191735 AATACCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCAAC 1191676
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | || || || ||||| ||||| ||||| || || ||||||||
Sbjct 1191675 CTCCAAAGTGATGGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCAT 1191628
>seq11
Length=2453602
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||| ||||||||||| || || || || | ||| ||| ||||| || || || ||
Sbjct 170637 ACCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGA 170696
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|| | |||| |||||||| || || || || ||||| | |||||||| | ||
Sbjct 170697 CAAGGTTCTTCCATCCTCCAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGG 170756
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| ||| || || ||| || || ||||| || ||| || || | | ||| ||
Sbjct 170757 GATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAAC 170816
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | |||||||| ||||| || |||||||| || || ||||||||
Sbjct 170817 CTCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 170864
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||| ||||||||||| || || || || | ||| ||| ||||| || || || ||
Sbjct 170865 ACCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGA 170924
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|| | |||| |||||||| || || ||||| || || | |||||||| | ||
Sbjct 170925 CAAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATTAATCTCTGCTGGTCTGGTGG 170984
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| ||| || || ||| || || ||||| || ||| || || | | ||| ||
Sbjct 170985 AATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAAC 171044
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | |||||||| ||||| || |||||||| || || || |||||
Sbjct 171045 CTCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 171092
>seq10
Length=3096056
Score = 86.0 bits (94), Expect = 4e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATC-GT 43952
||| ||||||||||| || ||||| || | || ||| ||||| |||||||| || |
Sbjct 917530 ACCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATATTATAGTCAGA 917589
Query 43953 TTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAG 44012
|| | || |||| |||||||| || || ||||| ||||| | ||| ||||| | |
Sbjct 917590 CAAAGTTCTGC-CATCCTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTG 917648
Query 44013 GTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCA 44072
| | || || || ||| ||| || || || | | | ||| || | | |||||
Sbjct 917649 GAATTCCCTCCTTGTCTTGAATCTTGGACTTAACATTGTCGATAGTGTCGGAAGACTCCA 917708
Query 44073 CATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
| || | || || || ||||| || || || || ||||| ||||||||
Sbjct 917709 CCTCCAAGGTGATAGTCTTACCTGTCAAGGTTTTAACAAAAATTTGCAT 917757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354777526494516
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |