Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq11 174 1e-38 >seq11 Length=2453602 Score = 174 bits (192), Expect = 1e-38 Identities = 553/848 (65%), Gaps = 21/848 (2%) Strand=Plus/Plus Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919 ||||| || || || ||||| |||||||| |||||||| || || | ||||| || ||| Sbjct 2212096 TTTTGGTAATCACTGACTCTCTTTTCAAAGAAGTTTGTCTTACCAGCCAACGAGATGTTT 2212155 Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAATAGTA----TTTTTTACACCCTAATTCTAG 12975 |||||||| || || || ||| | ||| | ||| || || |||| || | | Sbjct 2212156 TCCATAAAGTCAAATGGGTTTGT--AAC-GTTGTAGACCTTCTTGTTACCC-AAAGCCAC 2212211 Query 12976 TAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTAT 13035 ||||||||||||||| ||||| || | || || ||| || | | ||||| || | Sbjct 2212212 TAACAATCTGTCAGCCACAAATTCAACATATTGACACATCAACTTTGAATTCATACCCAA 2212271 Query 13036 TAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAAC 13095 ||| || || | ||| || | || || | |||||| ||| |||| ||||| ||| Sbjct 2212272 CAATGAAACTGGTAAAGCGTCACTGAAGAACTCTTTTTCGATAACAACAGCTTCTGTAAT 2212331 Query 13096 TATGTCTCTTATTACGTTCTCTA--ATGGAGGATTTGATAGATGCTTAAACATCATACAT 13153 || | ||| | | ||| | | ||| || | |||| |||| || || Sbjct 2212332 AATCT-TCTCAACAATTTC-CGAGTTTGGTCTGTTCTCCAAATGCGAGAACAACAAGCAG 2212389 Query 13154 GCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCC 13213 ||||| || |||||| ||||| || | | || | |||||| || || || | ||| Sbjct 2212390 GCAAAGTCGGTGTGCAAACCTTCGTCACGGCAAATCAACTCGTTGGAGAAAGTCAAACCA 2212449 Query 13214 GGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATT 13273 ||||| | |||| || || | ||| || |||| || || || || ||| || || Sbjct 2212450 GGCATCAAGCCTCTCTTCTTCAACCAGAAGATAGATGCGAAGGAGCCACTAAAGAAGATA 2212509 Query 13274 CCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATC 13333 |||||||| ||||| || || | ||| || |||||| || || | | | ||| Sbjct 2212510 CCTTCAACGGCTGCGAAAGCAACCAATCTCTCACCAAACAATGCATCGTCATCATTAATC 2212569 Query 13334 CACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAAT 13393 || | |||||||| || || | || | || || || || || || ||||| Sbjct 2212570 CATCTCAAGGCCCAGTCAGCCTTCTTTTGGATACATGGGATGTTCTCAATAGCATTAAAC 2212629 Query 13394 AAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTAT---CAATAAGCTATACATT 13450 ||| | | || ||| ||| ||| || ||||| || |||| || || || Sbjct 2212630 AAAAAGTCAGCCTCTTTAGGGTCCTTAATGTAGGTATCAATAAGCAATGAG---TATGTT 2212686 Query 13451 TCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACC 13510 || || || || || |||||| ||||| ||||| || ||||| | || |||| || Sbjct 2212687 TCAGAGTGGATGTTCTCCATCATAATTTGAAAACCGTAGAAACACTTGGCTTCTGGCACT 2212746 Query 13511 TGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCa 13570 || || |||| | | || | || | ||||| ||||| || || || ||| || ||| Sbjct 2212747 TGGACCTCGGCGGAGAAGTTCTCGACCAAGTTCTCGTTGACAATACCATCAGAGGCCGCA 2212806 Query 13571 aaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAAC---TTTAACCAA 13627 |||||||| | || | ||| || | ||||||| || || | ||| ||| Sbjct 2212807 AAAAAAGCTAAGATACGAGAAATGAAAAATCTTTCGTTCTCATTCATCTTGTTTTGCCAG 2212866 Query 13628 TCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTC 13687 || | || || |||||||| ||||| | ||||| |||||||| | ||||| Sbjct 2212867 TCATGGGTGTCCTTGCCTAAATCTATTTCCTCGGCAGTCCAGAAAGAAGCTTCTGCCTTT 2212926 Query 13688 TTATACAT 13695 |||||||| Sbjct 2212927 TTATACAT 2212934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982310705834