Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq11 125 6e-24 seq17 123 2e-23 seq10 122 8e-23 seq16 95.1 1e-14 >seq11 Length=2453602 Score = 125 bits (138), Expect = 6e-24 Identities = 171/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || || |||||||||| ||| || ||||||||||| || |||||||| | | Sbjct 170854 AAAATTTGCATACCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATG 170913 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 || || || || || | |||||||| || || || |||| |||||||| ||| Sbjct 170914 TTGTAGTCAGACAAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATTAATCTCTGC 170973 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 || ||||| |||||||| || ||||| | || || | ||||||| | | |||||| Sbjct 170974 TGGTCTGGTGGAATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCA 171033 Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | | || || || | || || || || ||||| | ||| || || || |||||||| Sbjct 171034 GAGGACTCAACCTCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 171092 Score = 118 bits (130), Expect = 1e-21 Identities = 166/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| ||| || ||||||||||| || |||||||| | ||| || || | Sbjct 171094 CCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 171153 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || | |||||||| || || || |||| || ||||| ||||| ||||| || Sbjct 171154 AAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGTGGG 171213 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||| || ||||| | || || | ||||||| | | ||||||| | || || Sbjct 171214 ATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACC 171273 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTTA 95012 || | |||||||| || ||||| || || || || || || ||||| |||| Sbjct 171274 TCCAAAGTGATGGTCTTACCAGTTAGGGTCTTAACGAAAATTTGCAT-CTTA 171324 Score = 107 bits (118), Expect = 2e-18 Identities = 167/239 (70%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || || |||||||||| ||| || ||||||||||| || |||||||| | | Sbjct 170626 AAAATTTGCATACCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATG 170685 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 || || || || || | |||||||| || || || | || || ||||| ||| Sbjct 170686 TTGTAGTCAGACAAGGTTCTTCCATCCTCCAATTGCTTACCAGCGAAAATCAATCTCTGC 170745 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 || ||||| || ||||| || ||||| | || || | ||||||| | | |||||| Sbjct 170746 TGGTCTGGTGGGATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCA 170805 Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | | || || || | || || || || ||||| | ||| || || || || ||||| Sbjct 170806 GAGGACTCAACCTCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 170864 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| |||| ||| || ||||||||||| || |||||||| | ||| || || | Sbjct 170410 CCACCTCTTAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 170469 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || | |||||||| || || || |||| || ||||| ||||| ||||| || Sbjct 170470 AAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGTGGG 170529 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||| || ||||| | || || | ||||||| | | ||||||| | || || Sbjct 170530 ATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACC 170589 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || || || ||||| | ||| || || || || ||||| Sbjct 170590 TCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 170636 >seq17 Length=1373282 Score = 123 bits (136), Expect = 2e-23 Identities = 177/246 (72%), Gaps = 5/246 (2%) Strand=Plus/Minus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || || |||||||||| ||| |||||||| || || || |||||||| | | Sbjct 1191866 AAAATTTGCATACCACCTCTCAATCTCAAAACCAAGTGTAAGGTGGACTCCTTTTGGATG 1191807 Query 94829 TTATAATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886 || || ||| ||| ||| | || |||| || || || | ||||| ||||||| Sbjct 1191806 TTGTAGTCGG--ATAAGGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTT 1191749 Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946 |||| ||||| ||||||||||| ||||| | || || | ||||||| | | | |||| Sbjct 1191748 GCTGGTCTGGTGGAATACCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGT 1191689 Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006 ||| | || || || | |||||||| || ||||| | || || || || || |||| Sbjct 1191688 CAGAGGACTCAACCTCCAAAGTGATGGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCA 1191629 Query 95007 TGCTTA 95012 | |||| Sbjct 1191628 T-CTTA 1191624 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| ||| ||||||||||| || || |||||||| | ||| || ||| Sbjct 1192310 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCG--G 1192253 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 ||| ||| | || |||| ||| || || |||| |||||||| || || ||||| | Sbjct 1192252 ATAAGGTTCTACCGTCTTCCAACTGCTTACCAGCAAAAATTAATCTCTGTTGGTCTGGTG 1192193 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 ||||||| || ||||| | || || | ||||||| | | | ||||||| | || | Sbjct 1192192 GAATACCCTCCTTGTCTTGGATCTTAGACTTGACGTTGTCAATGGTGTCAGAGGACTCAA 1192133 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | || || || || || || | || || || || |||||||| Sbjct 1192132 CCTCCAAGGTAATAGTCTTACCGGTCAAGGTCTTGACGAAAATCTGCAT 1192084 >seq10 Length=3096056 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| ||| ||||||||||| ||||| |||||||| | ||||| || | Sbjct 917531 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATATTATAGTCAGAC 917590 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| || |||||||| || || || |||| || |||||||| || || || ||| Sbjct 917591 AAAGTTCTGCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGA 917650 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || ||||| | ||| || | ||| || | ||| |||||| | || || Sbjct 917651 ATTCCCTCCTTGTCTTGAATCTTGGACTTAACATTGTCGATAGTGTCGGAAGACTCCACC 917710 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | ||||| || || || || | ||||| ||||| || ||||| Sbjct 917711 TCCAAGGTGATAGTCTTACCTGTCAAGGTTTTAACAAAAATTTGCAT 917757 >seq16 Length=1434301 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| ||| ||||||||||| || || |||||||| | ||| || || | Sbjct 509184 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCAGAC 509125 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || || |||||||| || || || |||| || ||||| || || || || || Sbjct 509124 AAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGTTGGTCAGGTGGG 509065 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || ||||| | || || | ||| ||| | ||| |||||| | || || Sbjct 509064 ATTCCCTCCTTGTCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCGGAAGACTCCACC 509005 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | ||||| || || || || | || || || || || ||||| Sbjct 509004 TCCAAGGTGATAGTCTTACCTGTCAAGGTCTTAACGAAAATTTGCAT 508958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448291104738120