Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16]
17 sequences; 21,255,474 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq11 149 7e-31
seq2 123 3e-23
>seq11
Length=2453602
Score = 149 bits (164), Expect = 7e-31
Identities = 567/889 (64%), Gaps = 25/889 (3%)
Strand=Plus/Plus
Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244
||||| |||||||| ||||| ||||| || || |||||||| || |||| || || |
Sbjct 2212096 TTTTGGTAATCACTGACTCTCTTTTCAAAGAAGTTTGTCTTACCAGCCAACGAGATGTTT 2212155
Query 21245 TCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAAT 21304
|||||||| |||||||| ||| | || | | || || ||||| | |||
Sbjct 2212156 TCCATAAAGTCAAATGGGTTTGTAACGTTGTAGACCTTCTTGTTACCCAAAGCCACTAAC 2212215
Query 21305 AATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAAT 21364
||||| || || |||||||| | |||||||||||| || | |||||||||| | ||||
Sbjct 2212216 AATCTGTCAGCCACAAATTCAACATATTGACACATCAACTTTGAATTCATACCCAACAAT 2212275
Query 21365 TTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATA 21424
|| || | ||| | | || || |||||| ||| || ||||| ||| ||
Sbjct 2212276 GAAACTGGTAAAGCGTCACTGAAGAACTCTTTTTCGATAACAACAGCTTCTGTAATAATC 2212335
Query 21425 TT-----TATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATG 21479
|| | | ||| || | || | | || || |||| ||| || |
Sbjct 2212336 TTCTCAACAATTTCCGAG-----TTTGGTCTGTTCTCCAAATGCGAGAACAACAAGCAGG 2212390
Query 21480 CAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGG 21539
|||| || ||||||||||| || | | || || || || || || || ||||| |
Sbjct 2212391 CAAAGTCGGTGTGCAAACCTTCGTCACGGCAAATCAACTCGTTGGAGAAAGTCAAACCAG 2212450
Query 21540 GCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGC 21599
|||| || |||||||| || ||||| || || || || || | || |||||| || |
Sbjct 2212451 GCATCAAGCCTCTCTTCTTCAACCAGAAGATAGATGCGAAGGAGCCACTAAAGAAGATAC 2212510
Query 21600 CCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCC 21659
| |||||||| || || ||||| |||| ||||| | | || | ||| ||||
Sbjct 2212511 CTTCAACGGCTGCGAAAGCAACCAATCTCTCACCAAACAATGCATCGTCATCATTAATCC 2212570
Query 21660 ATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA-A 21718
|| | ||||| | ||||| | || ||||| || | |||||||| || || |
Sbjct 2212571 ATCTCAAGGCCCAGTCAGCCTTCTTTTGGATACATGGGATGTTCTCAATAGCATTAAACA 2212630
Query 21719 AGATGAtttttttCATCTACA---TCGGTTATGNNNNNNNNNNNNNNNNNACTATACATT 21775
| | | | | ||| | || | ||| || ||
Sbjct 2212631 AAAAG----TCAGCCTCTTTAGGGTCCTTAATGTAGGTATCAATAAGCAATGAGTATGTT 2212686
Query 21776 TCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACAT 21835
||||| || || || || ||| || ||||| ||||| ||||| | || |||| |
Sbjct 2212687 TCAGAGTGGATGTTCTCCATCATAATTTGAAAACCGTAGAAACACTTGGCTTCTGGCACT 2212746
Query 21836 TGAACCTCGGAATA-AAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGC 21894
|| ||||||| | || | | || ||||||| || || || || |||||| ||| ||
Sbjct 2212747 TGGACCTCGGCGGAGAAGTTCTCGA-CCAAGTTCTCGTTGACAATACCATCAGAGGCCGC 2212805
Query 21895 AAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT----TTTTTCC 21950
|||||| || || ||| || ||| ||| |||||| || || || |||| ||
Sbjct 2212806 AAAAAAAGCTAAGATACGAGAAATGAAAAATCTTTCGTTCTC-ATTCATCTTGTTTTGCC 2212864
Query 21951 AATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCT 22010
| || || || |||||||| ||| || | ||||| || ||| ||||
Sbjct 2212865 AGTCATGGGTGTCCTTGCCTAAATCTATTTCCTCGGCAGTCCAGAAAGAAGCTTCTGCCT 2212924
Query 22011 TTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAA 22059
|||||||||| |||||| || | ||| | || ||||| | |||||
Sbjct 2212925 TTTTATACATTTGCCAGATCTCGTGGTATCTGATAGGAAACAACACAAA 2212973
>seq2
Length=1085221
Score = 123 bits (136), Expect = 3e-23
Identities = 301/453 (66%), Gaps = 6/453 (1%)
Strand=Plus/Minus
Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244
||||| || ||||| ||||| |||||||| || |||||||| || |||| || || |
Sbjct 237813 TTTTGGTAGTCACTGACTCTCTTTTCGAAGAAGTTTGTCTTACCAGCCAACGAGATGTTT 237754
Query 21245 TCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAAT 21304
|||||||| |||||||| ||| | || | | || || ||||| | ||
Sbjct 237753 TCCATAAAGTCAAATGGGTTTGTAACGTTGTAGACCTTCTTGTTACCCAAAGCAACCAAC 237694
Query 21305 AATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAAT 21364
||||| || ||||| ||||| | |||||| |||||||| | |||||||| | ||||
Sbjct 237693 AATCTGTCAGCTACGAATTCGACATATTGGCACATTAACTTTGCGTTCATACCCAACAAT 237634
Query 21365 TTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATA 21424
|| || | ||| | || || || ||| || || || ||||| || ||
Sbjct 237633 GAAACGGGTAAAGCGTCAGTGAAGAACTCTTTCTCGATGCCAACAGCTTCTGTGATGATC 237574
Query 21425 TTT---ATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCA 21481
||| | || || || | || | | || || |||| |||||| ||
Sbjct 237573 TTTTCAACAATTTCAGG-GT--TTGGTCTGTTCTCCAAGTGCGAGAACAACAAACAGGCG 237517
Query 21482 AAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGC 21541
|| || ||||||||||| || | | || || || ||||| || || ||||| |||
Sbjct 237516 AAGTCGGTGTGCAAACCTTCGTCACGGCAGATCAACTCGTTAGAGAAGGTCAAACCAGGC 237457
Query 21542 ATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCC 21601
|| || |||||||| || ||||| || || || || || | || ||||| || ||
Sbjct 237456 ATCAAGCCTCTCTTCTTCAACCAGAAGATAGATGCGAAGGAACCACTGAAGAAGATACCT 237397
Query 21602 TCAACGGCAGCAAATGCAACTAATCGTTCACCG 21634
||||| || || || ||||| |||| ||||||
Sbjct 237396 TCAACAGCCGCGAAAGCAACCAATCTCTCACCG 237364
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531900686971080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |