Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq17 104 2e-17 seq11 104 2e-17 seq10 102 7e-17 seq16 93.3 4e-14 seq2 89.7 4e-13 >seq17 Length=1373282 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || || || || | ||||| | |||||||| | Sbjct 1191856 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACTATTACTTTAGAAGTCGAATCTTCT 1191915 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | ||||| ||||| ||||| || || || || || || ||| Sbjct 1191916 GACACTATTGACAATGTCAAGTCTAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAA 1191975 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||| | || || |||||| | ||||| | |||| | | |||||| ||| Sbjct 1191976 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCCGATTACAAC 1192035 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| |||||||| || | || || || |||||||||||||| || Sbjct 1192036 ATTCAGAAAGAATCCACCTTACACTTGGTCTTAAGATTGAGAGGTGG 1192082 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || |||||| | || || || || |||||||| || | || || | || || ||| || Sbjct 1191625 AAGATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATCACTTTGGAGGTTGAGTCC 1191684 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 |||||||| || | ||||| ||||| ||||| ||||| || || || || Sbjct 1191685 TCTGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGTATTCCACCAGAC 1191744 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || || ||| |||| | || || |||||| | ||||| | |||| | | ||| || Sbjct 1191745 CAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCCGACTAC 1191804 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||| || || || | || || || || ||||||||||| || Sbjct 1191805 AACATCCAAAAGGAGTCCACCTTACACTTGGTTTTGAGATTGAGAGGTGG 1191854 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || || || || | |||||| | || || ||| || Sbjct 1192084 ATGCAGATTTTCGTCAAGACCTTGACCGGTAAGACTATTACCTTGGAGGTTGAGTCCTCT 1192143 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| ||||| ||||| || || || || || || ||| Sbjct 1192144 GACACCATTGACAACGTCAAGTCTAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAA 1192203 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| | |||| | || ||||| | ||||| | |||| | | ||| || ||| Sbjct 1192204 CAGAGATTAATTTTTGCTGGTAAGCAGTTGGAAGACGGTAGAACCTTATCCGACTACAAC 1192263 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| || || || | || || || || ||||||||||| || Sbjct 1192264 ATCCAAAAGGAGTCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 1192310 >seq11 Length=2453602 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || ||||| || | |||||| | || || ||| || Sbjct 170864 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGTCCTCT 170805 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| ||||| ||||| || || || || || || || Sbjct 170804 GACACCATTGATAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAG 170745 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||||| || || |||||| | || |||| |||| | | || || ||| Sbjct 170744 CAGAGATTGATTTTCGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTACAAC 170685 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| || || || | || ||||| || ||||||||||| || Sbjct 170684 ATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTGAGAGGTGG 170638 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || |||||| | || || || || ||||||| || | || || | || || ||| || Sbjct 171323 AAGATGCAAATTTTCGTTAAGACCCTAACTGGTAAGACCATCACTTTGGAGGTTGAGTCC 171264 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 |||||||| || | ||||| ||||| ||||| || || || || || || Sbjct 171263 TCTGACACCATTGATAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCAGAC 171204 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || |||||| |||||| | || |||||| | || |||| |||| | | || || Sbjct 171203 CAGCAGAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTAC 171144 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||| || || || | || ||||| || ||||||||||| || Sbjct 171143 AACATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTGAGAGGTGG 171094 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || ||||| || | |||||| | || || ||| || Sbjct 171092 ATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGTCCTCT 171033 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| ||||| ||||| || || || || || || || Sbjct 171032 GACACCATTGATAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAG 170973 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| | |||| | || |||||| | || |||| |||| | | || || ||| Sbjct 170972 CAGAGATTAATTTTTGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTACAAC 170913 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| || || || | || ||||| || ||||||||||| || Sbjct 170912 ATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTGAGAGGTGG 170866 >seq10 Length=3096056 Score = 102 bits (112), Expect = 7e-17 Identities = 163/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043 || ||| |||||| | ||||| ||||| || || || || | || ||| | || || || Sbjct 917764 AACCAAGATGCAAATTTTTGTTAAAACCTTGACAGGTAAGACTATCACCTTGGAGGTGGA 917705 Query 24044 GGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCC 24103 | | |||||| ||||| | || || |||||| ||||| || || || || || Sbjct 917704 GTCTTCCGACACTATCGACAATGTTAAGTCCAAGATTCAAGACAAGGAGGGAATTCCACC 917645 Query 24104 CGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGA 24163 || ||||| ||| |||||| | || |||||| | || |||| ||||| | || Sbjct 917644 TGACCAACAAAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGCAGAACTTTGTCTGA 917585 Query 24164 TTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || ||||| || ||||| | || || || || ||||||||||| || Sbjct 917584 CTATAATATCCAAAAGGAGTCTACCTTGCACTTGGTTTTGAGATTGAGAGGTGG 917531 >seq16 Length=1434301 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043 || ||| |||||| | || || || || || || || || | || ||| | || || || Sbjct 508951 AACCAAGATGCAAATTTTCGTTAAGACCTTGACAGGTAAGACTATCACCTTGGAGGTGGA 509010 Query 24044 GGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCC 24103 | | |||||| ||||| | || || ||||| ||||| || || || || || Sbjct 509011 GTCTTCCGACACTATCGACAACGTTAAGTCCAAGATCCAAGACAAGGAGGGAATCCCACC 509070 Query 24104 CGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGA 24163 || ||||||||| |||||| | || |||||| | || |||| ||||| | | || Sbjct 509071 TGACCAACAGAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGA 509130 Query 24164 TTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| ||||| || || || | || || || || ||||||||||| || Sbjct 509131 CTACAACATCCAAAAGGAGTCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 509184 >seq2 Length=1085221 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 104589 TTTGTATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATT 104648 || ||| || | |||| ||||| || || || ||||| || ||| || || || | Sbjct 237811 TTGGTAGTCACTGACTCTCTTTTCGAAGAAGTTTGTCTTACCAGCCAACGAGATGTTTTC 237752 Query 104649 CATAAATTCGAAAGGATTC--AAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAAC 104706 |||||| || || || || || || || | || || || |||| | | |||| Sbjct 237751 CATAAAGTCAAATGGGTTTGTAACGTTGTAGACC-TTCTTGTTACCCAAAG-CAACCAAC 237694 Query 104707 AGTCGATCCGCCACAAATTCGATGTACTCGCACATAGAATGTGCATTCATGCCCAGCATT 104766 | || || || || ||||||| || | |||||| | | ||| ||||| |||| || | Sbjct 237693 AATCTGTCAGCTACGAATTCGACATATTGGCACATTAACTTTGCGTTCATACCCAACAAT 237634 Query 104767 GCGACGGGTAAAGCGTTAGTaaaaaaaTCTTTCTCGATGTCCACGGCTTC 104816 | ||||||||||||| ||| || || |||||||||||| | || ||||| Sbjct 237633 GAAACGGGTAAAGCGTCAGTGAAGAACTCTTTCTCGATGCCAACAGCTTC 237584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935910922635