Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16]
17 sequences; 21,255,474 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq16 111 1e-19
seq10 102 7e-17
seq17 100 2e-16
seq11 87.8 1e-12
>seq16
Length=1434301
Score = 111 bits (122), Expect = 1e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780
|||| |||| |||| |||||||||||||| ||||||||||| | || |||| || |
Sbjct 509172 CTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTGCCA 509113
Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840
||||||||||| || || ||| |||| | | ||||||||| || | ||||| |||
Sbjct 509112 TCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGTTGGTCAGGTGGGATTCCCTCCTTG 509053
Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || | ||| || | | | | ||||||| | |||| |||| ||||||
Sbjct 509052 TCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCGGAAGACTCCACCTCCAAGGTGATA 508993
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939
|| || || |||| || || || ||||| ||||| |||
Sbjct 508992 GTCTTACCTGTCAAGGTCTTAACGAAAATTTGCATCTTG 508954
>seq10
Length=3096056
Score = 102 bits (112), Expect = 7e-17
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780
|||| |||| |||| || ||||||||||| || || ||||| | || ||| || |
Sbjct 917543 CTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATATTATAGTCAGACAAAGTTCTGCCA 917602
Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840
||||||||||| || || ||| |||| | | |||||||| || | ||||| |||
Sbjct 917603 TCCTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATTCCCTCCTTG 917662
Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| ||| | ||| || | | | | ||||||| | |||| |||| ||||||
Sbjct 917663 TCTTGAATCTTGGACTTAACATTGTCGATAGTGTCGGAAGACTCCACCTCCAAGGTGATA 917722
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939
|| || || |||| ||||| |||||||| ||||| |||
Sbjct 917723 GTCTTACCTGTCAAGGTTTTAACAAAAATTTGCATCTTG 917761
>seq17
Length=1373282
Score = 100 bits (110), Expect = 2e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780
|||| |||| |||| |||||||||||||| ||||||||||||| | |||| | ||
Sbjct 1192298 CTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCGGATAAGGTTCTACCG 1192239
Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840
|| ||||| || || || ||| |||| | | ||||||||| || | ||||| |||
Sbjct 1192238 TCTTCCAACTGCTTACCAGCAAAAATTAATCTCTGTTGGTCTGGTGGAATACCCTCCTTG 1192179
Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || | ||| || | | | | ||||| || ||| |||| ||| ||
Sbjct 1192178 TCTTGGATCTTAGACTTGACGTTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATA 1192119
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || ||||||| || ||||| |||||||||||
Sbjct 1192118 GTCTTACCGGTCAAGGTCTTGACGAAAATCTGCAT 1192084
>seq11
Length=2453602
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|||| |||||||||||||| ||||||||||| | || |||| | | |||||||||||
Sbjct 170890 TGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCCATCCTCCAATTGC 170949
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
|| || ||| |||| | | ||| ||||| || | ||||| ||||| || |
Sbjct 170950 TTACCAGCAAAAATTAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCTTGGATCTTG 171009
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
||| || | | | ||||| || ||| |||| ||| || || || || |||
Sbjct 171010 GACTTGACGTTATCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATTGTCTTACCAGTC 171069
Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935
| || ||||| |||||||||||
Sbjct 171070 AAAGTCTTGACGAAAATCTGCAT 171092
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| |||| || |||| || | |||| |||||||||||||| ||||||||||| | |
Sbjct 170410 CCACCTCTTAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 170469
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| |||| | | ||||||||||| || || ||| |||| | | ||| ||||| ||
Sbjct 170470 AAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGTGGG 170529
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| ||||| ||||| || | ||| || | | | ||||| || |||
Sbjct 170530 ATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACC 170589
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| ||| || || || || |||| || ||||| ||||| |||||
Sbjct 170590 TCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 170636
Score = 84.2 bits (92), Expect = 2e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|||| |||||||||||||| ||||||||||| | || |||| | | |||||||||||
Sbjct 171118 TGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCCATCCTCCAATTGC 171177
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
|| || ||| |||| | | ||| ||||| || | ||||| ||||| || |
Sbjct 171178 TTACCAGCAAAAATCAATCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGGATCTTG 171237
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
||| || | | | ||||| || ||| |||| |||||||| || || ||
Sbjct 171238 GACTTGACGTTATCAATGGTGTCAGAGGACTCAACCTCCAAAGTGATGGTCTTACCAGTT 171297
Query 16913 AGCGTTTTGACAAAAATCTGCATTTT 16938
|| || || || ||||| ||||| ||
Sbjct 171298 AGGGTCTTAACGAAAATTTGCATCTT 171323
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405087916070830
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |