Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq4 140 2e-28 seq10 105 4e-18 seq17 98.7 7e-16 seq16 96.9 2e-15 >seq4 Length=33375 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 5858 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 5917 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 5918 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 5952 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| | Sbjct 7834 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 7893 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 7894 GCCAATATTTAGCTTTA 7910 >seq10 Length=3096056 Score = 105 bits (116), Expect = 4e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||||||||| | ||| ||||| || | || ||||||||| ||||| || ||||| Sbjct 917530 ACCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATATTATAGTCAGA 917589 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 |||| | | || || ||||| || || ||||| || | | |||||| || | || Sbjct 917590 CAAAGTTCTGCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGG 917649 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 | || || ||||| ||| || ||| ||||| | || ||| || | || || Sbjct 917650 AATTCCCTCCTTGTCTTGAATCTTGGACTTAACATTGTCGATAGTGTCGGAAGACTCCAC 917709 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || || || ||||| ||||| ||||||||||| || || || ||||| || Sbjct 917710 CTCCAAGGTGATAGTCTTACCTGTCAAGGTTTTAACAAAAATTTGCATCTT 917760 >seq17 Length=1373282 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||||||| | || ||||| || | ||| || || ||||| |||||||| | Sbjct 1192084 TACCACCTCTCAATCTTAAGACCAAGTGTAAGGTGGATTCTTTCTGAATGTTGTAATCGG 1192025 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | || | |||| || ||||| || || || || || | | |||||| || | | Sbjct 1192024 ATAAGGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCTGGTG 1191965 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || || |||||| || || ||| ||||| | | ||| || | ||| | Sbjct 1191964 GAATACCCTCCTTGTCCTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGA 1191905 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||||| |||||||| ||||| ||||| || || ||||| || ||||| Sbjct 1191904 CTTCTAAAGTAATAGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 1191856 >seq16 Length=1434301 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||||||||| | ||| ||||| || | ||| ||||||||| || ||||| ||||| Sbjct 509185 ACCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCAGA 509126 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 ||| | | || || ||||| || || ||||| || | | ||||| || | || Sbjct 509125 CAAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGTTGGTCAGGTGG 509066 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 || || || ||||| || || ||| || || | || ||| || | || || Sbjct 509065 GATTCCCTCCTTGTCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCGGAAGACTCCAC 509006 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || || || ||||| ||||| |||||||| || ||||| || ||||| || Sbjct 509005 CTCCAAGGTGATAGTCTTACCTGTCAAGGTCTTAACGAAAATTTGCATCTT 508955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947130603127