Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq17 123 2e-23 seq10 114 1e-20 seq16 113 4e-20 seq11 109 5e-19 >seq17 Length=1373282 Score = 123 bits (136), Expect = 2e-23 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| ||||| | || || | ||||| || || ||| Sbjct 1191856 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACTATTACTTTAGAAGTCGAATCTTCT 1191915 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 |||||||| || || || ||| || ||| ||||| || || |||||||| |||| Sbjct 1191916 GACACTATTGA--CAATGTCAAGTCTAAGATCCAGGACAAGGAGGGTATTCCACCAGACC 1191973 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | || || || || || ||||| ||||| | | | || | |||||||| Sbjct 1191974 AACAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCCGATTACA 1192033 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | ||||| ||||||||||| |||| || || |||| | ||||| || Sbjct 1192034 ACATTCAGAAAGAATCCACCTTACACTTGGTCTTAAGATTGAGAGGTGG 1192082 Score = 100 bits (110), Expect = 2e-16 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||||||||| | || || | || || ||||| ||| Sbjct 1192084 ATGCAGATTTTCGTCAAGACCTTGACCGGTAAGACTATTACCTTGGAGGTTGAGTCCTCT 1192143 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| || ||| ||||| || || |||||||| |||||| Sbjct 1192144 GACACCATTGACAACGTCAAGTCTAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAA 1192203 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | |||||||| || || || || ||||| | | | || | ||| ||||| Sbjct 1192204 CAGAGATTAATTTTTGCTGGTAAGCAGTTGGAAGACGGTAGAACCTTATCCGACTACAAC 1192263 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 || ||||| || ||||| | || || || | || | ||||| || || || Sbjct 1192264 ATCCAAAAGGAGTCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGGTAACTA 1192316 >seq10 Length=3096056 Score = 114 bits (126), Expect = 1e-20 Identities = 148/200 (74%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || || ||||| ||||| | ||||| | || |||||||| || Sbjct 917757 ATGCAAATTTTTGTTAAAACCTTGACAGGTAAGACTATCACCTTGGAGGTGGAGTCTTCC 917698 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||||||||| || || ||| | || | ||| ||||| || || |||||||||||| Sbjct 917697 GACACTATCGA--CAATGTTAAGTCCAAGATTCAA-GACAAGGAGGGAATTCCACCTGAC 917641 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| | | |||||||| || || ||||| || |||| | ||| || || || Sbjct 917640 CAACAAAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGCAGAACTTTGTCTGACTAT 917581 Query 25176 AATATTCAAAAAGAATCCAC 25195 ||||| ||||| || || || Sbjct 917580 AATATCCAAAAGGAGTCTAC 917561 >seq16 Length=1434301 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| ||||| ||||| | ||||| | || |||||||| || Sbjct 508958 ATGCAAATTTTCGTTAAGACCTTGACAGGTAAGACTATCACCTTGGAGGTGGAGTCTTCC 509017 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| || ||| ||||| || || || |||||||||||| Sbjct 509018 GACACTATCGACAACGTTAAGTCCAAGATCCAAGACAAGGAGGGAATCCCACCTGACCAA 509077 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | |||||||| || || ||||| || |||| | || || || ||||| Sbjct 509078 CAGAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTACAAC 509137 Query 25179 ATTCAAAAAGAATCCAC 25195 || ||||| || ||||| Sbjct 509138 ATCCAAAAGGAGTCCAC 509154 >seq11 Length=2453602 Score = 109 bits (120), Expect = 5e-19 Identities = 166/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| ||||| | || || | || || ||||| ||| Sbjct 170636 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGTCCTCT 170577 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | || | ||| || ||| ||||| || || || ||||| ||||| Sbjct 170576 GACACCATTGA-TAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCA 170518 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | |||||||| || || ||||| || |||| | || || || ||||| Sbjct 170517 GCAGAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTACAA 170458 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 || ||||| || ||||| | || ||||| | || ||||||| || || || Sbjct 170457 CATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTAAGAGGTGGTAACTA 170404 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||||||||| ||||| | || || | || || ||||| ||| Sbjct 171092 ATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGTCCTCT 171033 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | || | ||| || ||| ||||| || || |||||||| ||||| Sbjct 171032 GACACCATTGA-TAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATTCCACCAGACCA 170974 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | |||||||| || || ||||| || |||| | || || || ||||| Sbjct 170973 GCAGAGATTAATTTTTGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTACAA 170914 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| || ||||| | || ||||| | || | ||||| || Sbjct 170913 CATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTGAGAGGTGG 170866 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| ||||| | || || | || || ||||| ||| Sbjct 170864 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGTCCTCT 170805 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | || | ||| || ||| ||||| || || || ||||| ||||| Sbjct 170804 GACACCATTGA-TAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCA 170746 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | ||||| || || || ||||| || |||| | || || || ||||| Sbjct 170745 GCAGAGATTGATTTTCGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTACAA 170686 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| || ||||| | || ||||| | || | ||||| || Sbjct 170685 CATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTGAGAGGTGG 170638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327910219855