Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16]
17 sequences; 21,255,474 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq11 104 2e-17
seq2 102 8e-17
seq10 100 3e-16
seq17 91.5 1e-13
seq16 91.5 1e-13
>seq11
Length=2453602
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||||||||| || | | ||||||||||| ||||||||||| |
Sbjct 170866 CCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 170925
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||||| | ||| ||||| | | | |||| | ||| ||||| || ||
Sbjct 170926 AAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATTAATCTCTGCTGGTCTGGTGGA 170985
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
||||| || ||||| ||| || || | | || | |||||| | ||||| |||
Sbjct 170986 ATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACC 171045
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | || |||||||||| ||| || || |||||||||||
Sbjct 171046 TCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 171092
Score = 95.1 bits (104), Expect = 1e-14
Identities = 168/243 (69%), Gaps = 3/243 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||||||||| || | | ||||||||||| ||||||||||| |
Sbjct 171094 CCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 171153
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||||| | ||| ||||| | | | || | | ||| ||||| || ||
Sbjct 171154 AAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGTGGG 171213
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
||||| || ||||| ||| || || | | || | |||||| | ||||| |||
Sbjct 171214 ATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACC 171273
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCTTAT-AATAT 138626
|| | || | || |||||||| || || || || ||||| ||||| ||||| ||||
Sbjct 171274 TCCAAAGTGATGGTCTTACCAGTTAGGGTCTTAACGAAAATTTGCAT--CTTATCTATAT 171331
Query 138627 TAT 138629
|||
Sbjct 171332 TAT 171334
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| || | ||||||||| || | | ||||||||||| ||||||||||| |
Sbjct 170410 CCACCTCTTAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 170469
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||||| | ||| ||||| | | | || | | ||| ||||| || ||
Sbjct 170470 AAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGTGGG 170529
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
||||| || ||||| ||| || || | | || | |||||| | ||||| |||
Sbjct 170530 ATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACC 170589
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | || |||||||||| ||| || || ||||| |||||
Sbjct 170590 TCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 170636
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||||||||| || | | ||||||||||| ||||||||||| |
Sbjct 170638 CCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 170697
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||||| | ||| ||||| | | || | | ||| ||||| || ||
Sbjct 170698 AAGGTTCTTCCATCCTCCAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGG 170757
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
||||| || ||||| ||| || || | | || | |||||| | ||||| |||
Sbjct 170758 ATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACC 170817
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | || |||||||||| ||| || || ||||| |||||
Sbjct 170818 TCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 170864
>seq2
Length=1085221
Score = 102 bits (112), Expect = 8e-17
Identities = 211/309 (68%), Gaps = 4/309 (1%)
Strand=Plus/Minus
Query 154247 GTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGG 154306
|||||| ||||||||| ||| || | | | | ||||||||| || ||||||| ||
Sbjct 351874 GTAGATACCGTCGATGGAATCCTCCTTCATGGCAACCAAGAAACAGGATGACATTTGAGG 351815
Query 154307 AATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCAT 154366
|| | || || || ||| | ||| ||| |||| ||||| | | |||| |||
Sbjct 351814 AAGAGGAGTACCAGCATTAAACAAGGTTGGAGAACCGTGAGTAAAGAATCTTTGCGACAT 351755
Query 154367 CATGCGGTACGTTTCGATGGCGTCTTCG-ATATCATCGCCGTGAATGCCGAGCGCGACGC 154425
|| | || ||||||| | |||| | ||||| || ||||| || |||| || || |
Sbjct 351754 CAAGTTATAACTTTCGATAAC-TCTTGGGATATCTTCTCCGTGTATACCGACTGCAACTC 351696
Query 154426 GCATGAGCATGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCAT 154485
||| | || ||| || |||||||||||||| | |||||| | || | ||| | ||
Sbjct 351695 TCATAATCAAGTGTTGAGGACGTTCGGCGACCTTTCCGTCAATTCTTAACAAATA-CGAT 351637
Query 154486 -TTTCGAGGGTTTTGTAACCGAAATACTTGTATTCAAAATCTAGCTCATGAGCGATGGCC 154544
| || | ||| ||| ||||||| || ||||| | ||||| | || | | | || |||
Sbjct 351636 CTCTCCAAGGTCTTGAAACCGAAGTAGTTGTAGTTGAAATCACGGTCGTAAACTATAGCC 351577
Query 154545 GCATCGAGC 154553
| | ||||
Sbjct 351576 GAGTTGAGC 351568
>seq10
Length=3096056
Score = 100 bits (110), Expect = 3e-16
Identities = 164/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | |||||| || || | | | ||||||||||| || || ||||| |
Sbjct 917531 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATATTATAGTCAGAC 917590
Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| ||| | || | ||||| | ||| ||||| | | | || | | |||||||| || ||
Sbjct 917591 AAAGTTCTGCCA-TCCTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGG 917649
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA--ATTGTTCCACGGTGTCGGTCGACTCC 138564
|| || || ||||| ||| | || | ||| |||| || | ||||||| ||||||
Sbjct 917650 AATTCCCTCCTTGTC-TTGAATCTTGGACTTAACATTG-TCGATAGTGTCGGAAGACTCC 917707
Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| | || | || ||||| |||| ||||| |||||||| |||||
Sbjct 917708 ACCTCCAAGGTGATAGTCTTACCTGTCAAGGTTTTAACAAAAATTTGCAT 917757
>seq17
Length=1373282
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/234 (69%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | |||||| || |||| | | ||||||||||| ||||||||||||
Sbjct 1191854 CCACCTCTCAATCTCAAAACCAAGTGTAAGGTGGACTCCTTTTGGATGTTGTAGTCGGAT 1191795
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || | ||| ||||| | |||| | | || ||||| || ||
Sbjct 1191794 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGTGGA 1191735
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|||||||| ||||| ||| || || | | || | |||||| | ||||| |||
Sbjct 1191734 ATACCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCAACC 1191675
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCTTAT 138621
|| | || | || |||||||| | || || || ||||| ||||| |||||
Sbjct 1191674 TCCAAAGTGATGGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCAT--CTTAT 1191623
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || || || | | | ||||||||||| ||||||||||||
Sbjct 1192310 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCGGAT 1192251
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || | || ||||| | | | |||| | ||||||||| || ||
Sbjct 1192250 AAGGTTCTACCGTCTTCCAACTGCTTACCAGCAAAAATTAATCTCTGTTGGTCTGGTGGA 1192191
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
||||| || ||||| ||| || || | | || | |||||| | ||||| |||
Sbjct 1192190 ATACCCTCCTTGTCTTGGATCTTAGACTTGACGTTGTCAATGGTGTCAGAGGACTCAACC 1192131
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | || ||||| |||| || || || |||||||||||
Sbjct 1192130 TCCAAGGTAATAGTCTTACCGGTCAAGGTCTTGACGAAAATCTGCAT 1192084
>seq16
Length=1434301
Score = 91.5 bits (100), Expect = 1e-13
Identities = 162/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || || || | | | ||||||||||| ||||||||||| |
Sbjct 509184 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCAGAC 509125
Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| || | || | ||||| | ||| ||||| | | | || | | ||||||||| || ||
Sbjct 509124 AAGGTTCTGCCA-TCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGTTGGTCAGGTGG 509066
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564
|| || || ||||| || | || | |||| ||| || | ||||||| ||||||
Sbjct 509065 GATTCCCTCCTTGTC-TTGGATCTTGGACTTAACGTTG-TCGATAGTGTCGGAAGACTCC 509008
Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| | || | || ||||| |||| || || || ||||| |||||
Sbjct 509007 ACCTCCAAGGTGATAGTCTTACCTGTCAAGGTCTTAACGAAAATTTGCAT 508958
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262294544240
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