Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq17 95.1 1e-14 seq11 86.0 6e-12 >seq17 Length=1373282 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | |||| || ||||| |||| || || ||||| ||||| ||||||||| Sbjct 1192082 CCACCTCTCAATCTTAAGACCAAGTGTAAGGTGGATTCTTTCTGAATGTTGTAATCGGAT 1192023 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | | || || | || || |||||| ||||||||| || || || || || Sbjct 1192022 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCTGGTGGA 1191963 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| || ||||| | || | ||||| | | |||||| Sbjct 1191962 ATACCCTCCTTGTCCTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGACT 1191903 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || |||| ||| || || ||||| ||||| Sbjct 1191902 TCTAAAGTAATAGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 1191856 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | |||| ||| ||||| || | || ||||| ||||| || ||||| ||| Sbjct 1192310 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCGGAT 1192251 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | | || || | ||| || ||||| | || |||| ||| || || || || Sbjct 1192250 AAGGTTCTACCGTCTTCCAACTGCTTACCAGCAAAAATTAATCTCTGTTGGTCTGGTGGA 1192191 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || ||||||||||| ||| || ||||| ||||| | | |||||| | ||| || Sbjct 1192190 ATACCCTCCTTGTCTTGGATCTTAGACTTGACGTTGT-CAATGGTGTCAGAGGACTCAAC 1192132 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || ||||||| || || || ||||||||||| Sbjct 1192131 CTCCAAGGTAATAGTCTTACCGGTCAAGGTCTTGACGAAAATCTGCAT 1192084 >seq11 Length=2453602 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | ||||| ||| || || || | || ||||| ||||| || ||||| || | Sbjct 170410 CCACCTCTTAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 170469 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || | || || ||||| | ||||||| |||||| || || || Sbjct 170470 AAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGTGGG 170529 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||||||||| ||| || ||||| | || | |||||| | ||| || Sbjct 170530 ATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACC 170589 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || || |||| ||| || || ||||| ||||| Sbjct 170590 TCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 170636 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | |||| ||| || || || | || ||||| ||||| || ||||| || | Sbjct 170638 CCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 170697 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || | || || |||||| | ||||||| |||||| || || || Sbjct 170698 AAGGTTCTTCCATCCTCCAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGG 170757 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||||||||| ||| || ||||| | || | |||||| | ||| || Sbjct 170758 ATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACC 170817 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || || |||| ||| || || ||||| ||||| Sbjct 170818 TCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 170864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500698956080