Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq17 109 5e-19 seq11 105 6e-18 seq10 105 6e-18 seq2 93.3 4e-14 seq16 82.4 7e-11 >seq17 Length=1373282 Score = 109 bits (120), Expect = 5e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || | || || ||||||||||| || || ||| | |||| || Sbjct 1191842 CTCAAAACCAAGTGTAAGGTGGACTCCTTTTGGATGTTGTAGTCGGATAAGGTTCTACCG 1191783 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || ||| | ||||||| ||||||||| || ||||| ||||| || Sbjct 1191782 TCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTG 1191723 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 || || || || |||| || | || | |||||| || ||||| || || | ||| | Sbjct 1191722 TCCTGGATCTTGGACTTGA-CGTTGTCAATGGTGTCAGAGGACTCAACCTCCAAAGTGAT 1191664 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || |||| || || || |||||||||||| Sbjct 1191663 GGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCATC 1191627 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 45144 GTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCT 45203 || ||||| || || || || |||||| | |||| || || |||||||| || || Sbjct 1192052 GTGGATTCTTTCTGAATGTTGTAATCGGATAAGGTTCTACCGTCTTCCAATTGCTTACCA 1191993 Query 45204 GCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTG 45263 ||| | ||||||| ||| ||||| || ||||| || || || || || || || ||| Sbjct 1191992 GCGAAGATCAATCTTTGTTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTAGACTTG 1191933 Query 45264 ATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTT 45323 | || | ||||| ||||| |||||||| | ||||| || || || || | ||| Sbjct 1191932 ACATTGTCAATAGTGTCAGAAGATTCGACTTCTAAAGTAATAGTCTTACCTGTCAAAGTC 1191873 Query 45324 TTTACAAAAATTTGCAT 45340 || || ||||||||||| Sbjct 1191872 TTGACGAAAATTTGCAT 1191856 Score = 86.0 bits (94), Expect = 6e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | |||| || || ||||||||||| || || ||| | |||| || Sbjct 1192298 CTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCGGATAAGGTTCTACCG 1192239 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||| || || || || | || |||| || ||||| || ||||| || || || Sbjct 1192238 TCTTCCAACTGCTTACCAGCAAAAATTAATCTCTGTTGGTCTGGTGGAATACCCTCCTTG 1192179 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| || || |||| || | || | |||||| || ||||| || || | |||| Sbjct 1192178 TCTTGGATCTTAGACTTGA-CGTTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAAT 1192120 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||| | || || || ||||| ||||| Sbjct 1192119 AGTCTTACCGGTCAAGGTCTTGACGAAAATCTGCAT 1192084 >seq11 Length=2453602 Score = 105 bits (116), Expect = 6e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| |||| |||| || || ||||||||||| || || || | |||| | | Sbjct 171106 CTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCCA 171165 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| |||||||| || || || || || || Sbjct 171166 TCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGTGGGATACCCTCCTTG 171225 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| || || |||| || | || | |||||| || ||||| || || | ||| | Sbjct 171226 TCTTGGATCTTGGACTTGA-CGTTATCAATGGTGTCAGAGGACTCAACCTCCAAAGTGAT 171284 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || ||||| || || || |||||||||||| Sbjct 171285 GGTCTTACCAGTTAGGGTCTTAACGAAAATTTGCATC 171321 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| |||| |||| || || ||||||||||| || || || | |||| | | Sbjct 170650 CTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCCA 170709 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || ||| | ||||||| |||||||| || || || || || || Sbjct 170710 TCCTCCAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGGATACCCTCCTTG 170769 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| || || |||| || | || | |||||| || ||||| || || | |||| Sbjct 170770 TCTTGGATCTTGGACTTGA-CGTTATCAATGGTGTCAGAGGACTCAACCTCCAAGGTAAT 170828 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | ||| || || ||||||||||| Sbjct 170829 TGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 170864 Score = 98.7 bits (108), Expect = 9e-16 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| |||| |||| || || ||||||||||| || || || | |||| | | Sbjct 170422 CTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCCA 170481 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| |||||||| || || || || || || Sbjct 170482 TCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGTGGGATACCCTCCTTG 170541 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| || || |||| || | || | |||||| || ||||| || || | |||| Sbjct 170542 TCTTGGATCTTGGACTTGA-CGTTATCAATGGTGTCAGAGGACTCAACCTCCAAGGTAAT 170600 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | ||| || || ||||||||||| Sbjct 170601 TGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 170636 Score = 96.9 bits (106), Expect = 3e-15 Identities = 167/243 (69%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 122832 GATTACGAATACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTC 122891 |||| | | ||||| || || || | |||||| || || | ||||||| | ||| Sbjct 2099008 GATTTCAACTACAATTACTTCGGTTTCAAAACCTTGGAGAGGTCATATTTGTTGAGAATT 2098949 Query 122892 GAGGAAAAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCAC 122951 || | ||||||||||||||| |||||| || | ||| | || || | || | ||| Sbjct 2098948 GACGGAAAGGTCGCCGAACGCCCTCAACACTTGATTATGAGAGTTGCAGTTGGTATACAC 2098889 Query 122952 GGACGCGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACG 123011 || ||| ||| || | | ||||| ||| | |||||||| |||| ||||||||| Sbjct 2098888 GGTGACGATATCCCAAGAGTGCTCGAAAGTTATAACTTGATGTCGCAAAGATTTTTCACT 2098829 Query 123012 CACGCGAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTT 123071 |||| ||| ||||||||| || || || ||||||| |||| || ||||| Sbjct 2098828 CACGGTTCTCCAACTTTGTTCAATGCTGGTACTCCTCTGCCTCAAATGTCATCCTGTTTC 2098769 Query 123072 TTG 123074 ||| Sbjct 2098768 TTG 2098766 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| |||| |||| || || ||||||||||| || || || | |||| | | Sbjct 170878 CTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCCA 170937 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | || |||| |||||||| || ||||| || || || Sbjct 170938 TCCTCCAATTGCTTACCAGCAAAAATTAATCTCTGCTGGTCTGGTGGAATACCCTCCTTG 170997 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| || || |||| || | || | |||||| || ||||| || || | |||| Sbjct 170998 TCTTGGATCTTGGACTTGA-CGTTATCAATGGTGTCAGAGGACTCAACCTCCAAGGTAAT 171056 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | ||| || || ||||| ||||| Sbjct 171057 TGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 171092 >seq10 Length=3096056 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | |||| || || ||||||||||||||||| || | ||| | | Sbjct 917543 CTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATATTATAGTCAGACAAAGTTCTGCCA 917602 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||| ||||| || ||||| || || || Sbjct 917603 TCCTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATTCCCTCCTTG 917662 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||| || || | || | |||||||||||||| || || | || | Sbjct 917663 TCTTGAATCTTGGACTTAACATTGTCGATAGTGTCGGAAGACTCCACCTCCAAGGTGATA 917722 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || || | ||||| ||||||||||||||| Sbjct 917723 GTCTTACCTGTCAAGGTTTTAACAAAAATTTGCATC 917758 >seq2 Length=1085221 Score = 93.3 bits (102), Expect = 4e-14 Identities = 230/347 (66%), Gaps = 4/347 (1%) Strand=Plus/Plus Query 122832 GATTACGAATACAAATATTTTGGATACAAAACGTT--AGAAAACGGATATTTGaaaaaaa 122889 |||| | | ||||| || || || | ||| || || ||| | || |||||| || || Sbjct 351596 GATTTCAACTACAACTACTTCGGTTTCAAGACCTTGGAGAGATCG--TATTTGTTAAGAA 351653 Query 122890 TCGAGGAAAAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGC 122949 | || | |||||||||||||||| |||||| || | ||| | || || | || | | Sbjct 351654 TTGACGGAAAGGTCGCCGAACGTCCTCAACACTTGATTATGAGAGTTGCAGTCGGTATAC 351713 Query 122950 ACGGACGCGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCA 123009 ||||| || ||| || | | ||||| ||| | |||||||| |||| ||| || | Sbjct 351714 ACGGAGAAGATATCCCAAGAGTTATCGAAAGTTATAACTTGATGTCGCAAAGATTCTTTA 351773 Query 123010 CGCACGCGAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTT 123069 | |||| ||| || ||||| || || || | ||||| |||| || |||| Sbjct 351774 CTCACGGTTCTCCAACCTTGTTTAATGCTGGTACTCCTCTTCCTCAAATGTCATCCTGTT 351833 Query 123070 TTTTGCTCACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCG 123129 | ||| | || || || || |||| ||||||||| || ||||| ||| | Sbjct 351834 TCTTGGTTGCCATGAAGGAGGATTCCATCGACGGTATCTACGATACTTTAAAGACTTGTG 351893 Query 123130 CGTTGATTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGAC 123176 | |||||||| ||| | ||| || || || || || | ||| || Sbjct 351894 CTTTGATTTCAAAAAGCGCCGGTGGTATTGGTTTGCACATCCACAAC 351940 >seq16 Length=1434301 Score = 82.4 bits (90), Expect = 7e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | |||| || || ||||||||||| || || || | |||| | | Sbjct 509172 CTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTGCCA 509113 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| || ||||| || || || || || || Sbjct 509112 TCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGTTGGTCAGGTGGGATTCCCTCCTTG 509053 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| | | || | | | || | || | |||||||||||||| || || | || | Sbjct 509052 TCTTGGA-TCTTGGACTTAACGTTGTCGATAGTGTCGGAAGACTCCACCTCCAAGGTGAT 508994 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || || | || || || |||||||||||| Sbjct 508993 AGTCTTACCTGTCAAGGTCTTAACGAAAATTTGCATC 508957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003103949320