Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2 149 6e-31 seq17 98.7 1e-15 seq16 95.1 1e-14 seq11 86.0 6e-12 >seq2 Length=1085221 Score = 149 bits (164), Expect = 6e-31 Identities = 420/640 (66%), Gaps = 9/640 (1%) Strand=Plus/Minus Query 132875 CCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGA 132934 |||| ||| ||||| ||| || || |||||| ||||| || ||||| | | | || | Sbjct 237542 CCAAGTGCGAGAACAACAAACAGGCGAAGTCGGTGTGCAAACCTTCGTCACGGCAGATCA 237483 Query 132935 GTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGG 132994 ||||| ||| ||||| || ||||| | ||| | || || | ||| || || | | Sbjct 237482 ACTCGTTAGAGAAGGTCAAACCAGGCATCAAGCCTCTCTTCTTCAACCAGAAGATAGATG 237423 Query 132995 CGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGA 133054 |||| || ||||||| || || || ||||||||||| |||| | ||| |||| Sbjct 237422 CGAAGGAACCACTGAAGAAGATACCTTCAACAGCCGCGAAAGCAACCAATCTCTCACCGA 237363 Query 133055 ACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACG 133114 || || || | | |||||| | || ||||| || ||||| | || | ||| | Sbjct 237362 ACAATGCATCGTCATCGTTGATCCATCTCAAGGCCCAGTCAGCCTTCTTTTGAATGCATG 237303 Query 133115 GCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAAC--GCACGTAGGT 133172 | || | ||||||||||| |||||| ||| || | ||| | | |||||| Sbjct 237302 GGATGTTCTCGATGGCGTTAAACAAA--AAGTCGGCCTCCTTAGGGTCCTTAATGTAGGT 237245 Query 133173 GTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTA 133232 ||| || || || || | || ||||| | |||||||| || || || ||||| Sbjct 237244 GTCAATAAGCAATGAGTATGTCTCAGAGTGGATATTCTCCATCATAATCTGGAAACCGTA 237185 Query 133233 AAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTT 133292 || ||| || || || || || || | ||| |||||||| || || || Sbjct 237184 GAAACACTTGGCTTCTGGGACTTGGACCTCAGCGGAGAAGTTCTCGACCAAGTTCTCATT 237125 Query 133293 GACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTT 133352 ||| || || || ||| ||||| || |||| | | |||||| | |||||| Sbjct 237124 GACAATACCATCAGAGGCAGCGAAGAAAGCCAAGATACGAGAAATGAAAAATCTCTCGTT 237065 Query 133353 GTCGTTCA---AGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGT 133409 ||||||| | | |||||| | |||||||| || || | |||||| |||| Sbjct 237064 CTCGTTCATCTTGTTTTGCCAGTCATGGGTGTCCTTACCAAGATCTATTTCCTCGGCGGT 237005 Query 133410 CCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATAT-TGTATGGGAA 133468 ||| || || ||||| || || |||||||| ||| || || ||| || |||||| Sbjct 237004 CCAGAAAGAAGCCTCTGCCTTCTTGTACATCTGCCAGATCTCGTGGTATCTGATTGGGAA 236945 Query 133469 AAATCACAAACCGGCGGGGGTTTTCGCGCAACAGCGGCTC 133508 || ||||| ||||| ||| ||| ||||| ||||| Sbjct 236944 CAA-GACAAAACGGCGCTTGTTCTCGACCAACAAGGGCTC 236906 >seq17 Length=1373282 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || || || || || ||| | || || ||| || | Sbjct 1192084 ATGCAGATTTTCGTCAAGACCTTGACCGGTAAGACTATTACCTTGGAGGTTGAGTCCTCT 1192143 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || |||| ||||| ||||| ||||| | ||||| Sbjct 1192144 GACACCATTGACAACG-TCAAGTCTAAGATCCAAGACAAGGAGGGTATTCCACCAGACCA 1192202 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||| | | |||| || || || ||| |||| |||| | ||| | ||||||||| Sbjct 1192203 ACAGAGATTAATTTTTGCTGGTAAGCAGTTGGAAGACGGTAGAACCTTATCCGACTACAA 1192262 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||||| | || |||| ||||| || | |||||||| || Sbjct 1192263 CATCCAAAAGGAGTCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 1192310 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || |||||||| ||||| || || | || || || |||||||| | || || ||| || Sbjct 1191625 AAGATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATCACTTTGGAGGTTGAGTCC 1191684 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | | |||| | || || |||| ||||| || || ||||| | || Sbjct 1191685 TCTGACACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAGGAAGGTATTCCACCAGA 1191743 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| || | | || | ||| || || || |||| |||| | ||| | |||||| Sbjct 1191744 CCAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCCGACTA 1191803 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||||| | || | || ||||| || | |||||||| || Sbjct 1191804 CAACATCCAAAAGGAGTCCACCTTACACTTGGTTTTGAGATTGAGAGGTGG 1191854 >seq16 Length=1434301 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || |||||||| ||||| || || | || || || || |||||| | || || ||| | Sbjct 508955 AAGATGCAAATTTTCGTTAAGACCTTGACAGGTAAGACTATCACCTTGGAGGTGGAGTCT 509014 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | |||| |||| || |||| ||||| |||||||| || | || Sbjct 509015 TCCGACACTATCGACAACG-TTAAGTCCAAGATCCAAGACAAGGAGGGAATCCCACCTGA 509073 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||||||| | | |||| || || || || |||| || | | ||| | ||||| Sbjct 509074 CCAACAGAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTA 509133 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||||| | || |||| ||||| || | |||||||| || Sbjct 509134 CAACATCCAAAAGGAGTCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 509184 >seq11 Length=2453602 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || |||||||| ||||| || || || || || || |||||||| | || || ||| || Sbjct 171323 AAGATGCAAATTTTCGTTAAGACCCTAACTGGTAAGACCATCACTTTGGAGGTTGAGTCC 171264 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | | |||| | || || |||| ||||| ||||| || || | || Sbjct 171263 TCTGACACCATTGATAACG-TCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCAGA 171205 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||| | | |||| || || || || |||| || | | ||| | ||||| Sbjct 171204 CCAGCAGAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTA 171145 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||||| | || |||| || || || | |||||||| || Sbjct 171144 CAACATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTGAGAGGTGG 171094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172693713280