Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16]
17 sequences; 21,255,474 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq11 109 4e-19
seq17 96.9 2e-15
>seq11
Length=2453602
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| || ||||| |||||||| ||||| | ||| || || || ||||| ||||| ||
Sbjct 170866 CCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 170925
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
| | ||| | |||| |||| || || || ||||| |||| || ||||||||| | ||
Sbjct 170926 AAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATTAATCTCTGCTGGTCTGGTGGA 170985
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| ||||||||||| ||||| |||||| | || | ||| || ||||||
Sbjct 170986 ATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACC 171045
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| | ||| || || || || || | |||||| || || |||||||||
Sbjct 171046 TCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCATA 171093
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| || ||||| |||||||| ||||| | ||| || || || ||||| ||||| ||
Sbjct 171094 CCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 171153
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
| | ||| | |||| |||| || || || ||||| || | || ||||||||| | ||
Sbjct 171154 AAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGTGGG 171213
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| ||||||||||| ||||| |||||| | || | ||| || ||||||
Sbjct 171214 ATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACC 171273
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
|| | || ||||| || || || || ||||| || || || ||||| ||
Sbjct 171274 TCCAAAGTGATGGTCTTACCAGTTAGGGTCTTAACGAAAATTTGCATCTT 171323
Score = 96.9 bits (106), Expect = 2e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 34752 TTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCC 34811
|| || || || || |||||||| ||||| | ||| || || || ||||| |||||
Sbjct 170407 TTACCACCTCTTAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCA 170466
Query 34812 GAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGC 34871
|| | | ||| | |||| |||| || || || ||||| || | || ||||||||| |
Sbjct 170467 GACAAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGT 170526
Query 34872 GGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCA 34931
|| | ||||||||||| ||||| |||||| | || | ||| || ||||
Sbjct 170527 GGGATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCA 170586
Query 34932 ACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || | ||| || || || || || | |||||| || || || ||||||
Sbjct 170587 ACCTCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCATA 170637
Score = 96.9 bits (106), Expect = 2e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| || ||||| |||||||| ||||| | ||| || || || ||||| ||||| ||
Sbjct 170638 CCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 170697
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
| | ||| | |||| |||| || || || || || || | || ||||||||| | ||
Sbjct 170698 AAGGTTCTTCCATCCTCCAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGG 170757
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| ||||||||||| ||||| |||||| | || | ||| || ||||||
Sbjct 170758 ATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACC 170817
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| | ||| || || || || || | |||||| || || || ||||||
Sbjct 170818 TCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCATA 170865
>seq17
Length=1373282
Score = 96.9 bits (106), Expect = 2e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 34752 TTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCC 34811
|| || || ||||| ||||| |||||||| | ||| || || || ||||| |||||
Sbjct 1192313 TTACCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCG 1192254
Query 34812 GAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGC 34871
|| | | ||| | || |||| ||| || || ||||| |||| || || |||||| |
Sbjct 1192253 GATAAGGTTCTACCGTCTTCCAACTGCTTACCAGCAAAAATTAATCTCTGTTGGTCTGGT 1192194
Query 34872 GGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCA 34931
|| | ||||||||||| ||||| |||||| | || | ||| || ||||
Sbjct 1192193 GGAATACCCTCCTTGTCTTGGATCTTAGACTTGACGTTGTCAATGGTGTCAGAGGACTCA 1192134
Query 34932 ACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || | ||| || || || || || | ||||| || || |||||||||
Sbjct 1192133 ACCTCCAAGGTAATAGTCTTACCGGTCAAGGTCTTGACGAAAATCTGCATA 1192083
Score = 86.0 bits (94), Expect = 4e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| || ||||| |||||||||||||| | ||| || || || ||||| ||||| ||
Sbjct 1191854 CCACCTCTCAATCTCAAAACCAAGTGTAAGGTGGACTCCTTTTGGATGTTGTAGTCGGAT 1191795
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
| | ||| | || |||| || || || || || || | || |||||||||| | ||
Sbjct 1191794 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGTGGA 1191735
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| || |||||||| ||||| |||||| | || | ||| || ||||||
Sbjct 1191734 ATACCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCAACC 1191675
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
|| | || ||||| || || || | ||||| || || || ||||| ||
Sbjct 1191674 TCCAAAGTGATGGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCATCTT 1191625
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633532739976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |