Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq11 109 4e-19 seq17 96.9 2e-15 >seq11 Length=2453602 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| |||||||| ||||| | ||| || || || ||||| ||||| || Sbjct 170866 CCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 170925 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | ||| | |||| |||| || || || ||||| |||| || ||||||||| | || Sbjct 170926 AAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATTAATCTCTGCTGGTCTGGTGGA 170985 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||||| |||||| | || | ||| || |||||| Sbjct 170986 ATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACC 171045 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | ||| || || || || || | |||||| || || ||||||||| Sbjct 171046 TCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCATA 171093 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| |||||||| ||||| | ||| || || || ||||| ||||| || Sbjct 171094 CCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 171153 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | ||| | |||| |||| || || || ||||| || | || ||||||||| | || Sbjct 171154 AAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGTGGG 171213 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||||| |||||| | || | ||| || |||||| Sbjct 171214 ATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACC 171273 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || | || ||||| || || || || ||||| || || || ||||| || Sbjct 171274 TCCAAAGTGATGGTCTTACCAGTTAGGGTCTTAACGAAAATTTGCATCTT 171323 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 34752 TTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCC 34811 || || || || || |||||||| ||||| | ||| || || || ||||| ||||| Sbjct 170407 TTACCACCTCTTAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCA 170466 Query 34812 GAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGC 34871 || | | ||| | |||| |||| || || || ||||| || | || ||||||||| | Sbjct 170467 GACAAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGT 170526 Query 34872 GGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCA 34931 || | ||||||||||| ||||| |||||| | || | ||| || |||| Sbjct 170527 GGGATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCA 170586 Query 34932 ACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | ||| || || || || || | |||||| || || || |||||| Sbjct 170587 ACCTCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCATA 170637 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| |||||||| ||||| | ||| || || || ||||| ||||| || Sbjct 170638 CCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 170697 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | ||| | |||| |||| || || || || || || | || ||||||||| | || Sbjct 170698 AAGGTTCTTCCATCCTCCAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGG 170757 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||||| |||||| | || | ||| || |||||| Sbjct 170758 ATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACC 170817 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | ||| || || || || || | |||||| || || || |||||| Sbjct 170818 TCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCATA 170865 >seq17 Length=1373282 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 34752 TTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCC 34811 || || || ||||| ||||| |||||||| | ||| || || || ||||| ||||| Sbjct 1192313 TTACCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCG 1192254 Query 34812 GAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGC 34871 || | | ||| | || |||| ||| || || ||||| |||| || || |||||| | Sbjct 1192253 GATAAGGTTCTACCGTCTTCCAACTGCTTACCAGCAAAAATTAATCTCTGTTGGTCTGGT 1192194 Query 34872 GGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCA 34931 || | ||||||||||| ||||| |||||| | || | ||| || |||| Sbjct 1192193 GGAATACCCTCCTTGTCTTGGATCTTAGACTTGACGTTGTCAATGGTGTCAGAGGACTCA 1192134 Query 34932 ACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | ||| || || || || || | ||||| || || ||||||||| Sbjct 1192133 ACCTCCAAGGTAATAGTCTTACCGGTCAAGGTCTTGACGAAAATCTGCATA 1192083 Score = 86.0 bits (94), Expect = 4e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| |||||||||||||| | ||| || || || ||||| ||||| || Sbjct 1191854 CCACCTCTCAATCTCAAAACCAAGTGTAAGGTGGACTCCTTTTGGATGTTGTAGTCGGAT 1191795 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | ||| | || |||| || || || || || || | || |||||||||| | || Sbjct 1191794 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGTGGA 1191735 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || |||||||| ||||| |||||| | || | ||| || |||||| Sbjct 1191734 ATACCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCAACC 1191675 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || | || ||||| || || || | ||||| || || || ||||| || Sbjct 1191674 TCCAAAGTGATGGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCATCTT 1191625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633532739976