Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq14 134 1e-26 seq13 113 4e-20 >seq14 Length=1898770 Score = 134 bits (148), Expect = 1e-26 Identities = 247/358 (69%), Gaps = 8/358 (2%) Strand=Plus/Minus Query 29985 GCTCACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 30044 ||| ||||| |||||||| | ||||| || ||||| ||||| ||||||| Sbjct 447099 GCTGACGTAGAACTGACAGAACACATGGCAGGGTGGAAGCGCCATTTTTGACAAGTCTGG 447040 Query 30045 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTC 30101 |||||||| ||| ||| ||||||||| || || | ||| ||| || | | || | | Sbjct 447039 AGGGTTCCACGCGGACATGATGATGCGTCTATCGTATGGATTGGTCTTCAATCTGCGCAC 446980 Query 30102 CACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTGT 30160 ||| |||| || |||||| | ||| | || ||||||||| | || |||| || Sbjct 446979 CACCTCGTT---CAACTGATCGAACCCTTTTCCGCTGTAGTCTGCATCGCA-GTCCACGT 446924 Query 30161 ACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCC 30220 |||| ||||| || || ||||||||||| |||||||| || |||| ||| |||||| | Sbjct 446923 ACTCGGCTCCAAAGTGTCTCCACTGGAAACCGTACACGGGGCCCAAGTCGCCCTCTCTGC 446864 Query 30221 TGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTA 30280 ||| || || || ||| | | |||||||| || || | |||||||| || | Sbjct 446863 GATGCGACAACCCGATCGAGTCTAGGTATTCTCTGGACCCATTTCCTTCCCAGATTTTAA 446804 Query 30281 CCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTC 30338 | || || ||| ||||| ||| | | ||| | || ||| ||||| || || || Sbjct 446803 CTCCTTTGGCGGTGAGCTTTTTTGCATCGGTGCATCCGTTGATAAACCAGAGGAGTTC 446746 >seq13 Length=1924819 Score = 113 bits (124), Expect = 4e-20 Identities = 262/386 (68%), Gaps = 12/386 (3%) Strand=Plus/Minus Query 29985 GCTCACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 30044 ||| |||||||| ||||| | ||||||| || ||||| ||||| ||||||| Sbjct 452681 GCTGACGTAAAATTGACAGAACATGTGGCAGGGCGGAAGGGCCATTTTTGACAAGTCTGG 452622 Query 30045 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTC 30101 |||||||| ||| || |||||||| || || | ||| ||| || | | | | | Sbjct 452621 AGGGTTCCACGCGGTCATTATGATGCGTCTATCGTATGGATTGGTCTTCAATCTCCGCAC 452562 Query 30102 CACGGCGTTTTGCAGCTGATCC-ACCCCCATCCCCGAGTAGTCTGCCCTCAT-GTCCGTG 30159 ||| |||| || |||||| | ||| ||| | | ||||||| ||| ||| | Sbjct 452561 CACCTCGTT---CAACTGATCGTATCCCTTTCCGCTA-TAGTCTGAA-TCACAGTCGACG 452507 Query 30160 TACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 30219 ||||| ||||| || |||||||||||||| |||||||| || |||| || || ||| Sbjct 452506 TACTCAGCTCCAAAGTGCCTCCACTGGAATCCGTACACGGGCCCCAAATCGCCTTCTCTG 452447 Query 30220 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 30279 | ||| || || || |||||| | |||||||| || || | |||||||| | Sbjct 452446 CGATGCGACAATCCGATCGAGTCCAAGTATTCTCTGGAGCCATTTCCTTCCCAGATTCTA 452387 Query 30280 ACCCCCTTCTCGGAGAGC-TCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTC 30338 || || || || ||| |||||| | | ||| | || |||| ||||| || || || Sbjct 452386 ACACCTTTGGAAGAAAGCTTCTTTGCA-TCGGTGCATCCGCTGATAAACCAGAGAAGTTC 452328 Query 30339 CTCCACGACGGCCTTCCAAAAGACCC 30364 | | || | ||| || |||||| Sbjct 452327 ATGGATGATACCTTTCAAATAGACCC 452302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617515339541