Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2 188 1e-42 seq11 132 9e-26 >seq2 Length=1085221 Score = 188 bits (208), Expect = 1e-42 Identities = 564/865 (65%), Gaps = 32/865 (4%) Strand=Plus/Plus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| |||||||||||||||| | || |||||||||||| || || ||| Sbjct 236963 GAGATCTGGCAGATGTACAAGAAGGCAGAGGCTTCTTTCTGGACCGCCGAGGAAATAGAT 237022 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACG-CTCTATCCAA-AGA-CGAGCAGCATTTTC-- 25588 || | ||||||| | | |||| | | || | ||| |||| || ||||| Sbjct 237023 CTTGGTAAGGACACCCATGACTGGCAAAACAAGATGAACGAGAACGAG-AGATTTTTCAT 237081 Query 25589 -TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGC 25647 || ||| | ||||| ||||| || |||||||||||||| || || ||||| || | Sbjct 237082 TTCTCGTA--TCTTGGCTTTCTTCGCTGCCTCTGATGGTATTGTCAATGAGAACTTGGTC 237139 Query 25648 GAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATG 25707 |||| ||| || || || || | || |||||||||||||||||||||||||| Sbjct 237140 GAGAACTTCTCCGCTGAGGTCCAAGTCCCAGAAGCCAAGTGTTTCTACGGTTTCCAGATT 237199 Query 25708 GCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGAC 25767 || || ||| | ||||||||| || | |||| | || ||||||| ||| Sbjct 237200 ATGATGGAGAATATCCACTCTGAGACATACTCATTGCTTATTGACACCTACATTAAGGAC 237259 Query 25768 GTCGCCGAGAGAGATCGGCTGTTTGGT----GCCATCGAGCACATACCCAGCATCAAGAG 25823 || | ||| || || |||| | ||||||||| |||| || |||| | | Sbjct 237260 ----CCTAAGGAGGCCGACTTTTTGTTTAACGCCATCGAGAACATCCCATGCATTCAAAA 237315 Query 25824 GAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCT 25883 |||||| |||||| ||| ||||||||| | || ||| || ||| | | Sbjct 237316 GAAGGCTGACTGGGCCTTGAGATGGATCAACGATGACGATGCATTGTTCGGTGAGAGATT 237375 Query 25884 GGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTG 25943 ||| || || || ||||| || || ||||| ||||| ||||| || || | |||||||| Sbjct 237376 GGTTGCTTTCGCGGCTGTTGAAGGTATCTTCTTCAGTGGTTCCTTCGCATCTATCTTCTG 237435 Query 25944 GCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003 | | ||| ||| || ||||| || || ||| || |||||| | ||| || | || Sbjct 237436 GTTGAAGAAGAGAGGCTTGATGCCTGGTTTGACCTTCTCTAACGAGTTGATCTGCCGTGA 237495 Query 26004 CGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACC 26063 ||| ||| | |||| || || ||||| || | | | || |||||| ||| ||| Sbjct 237496 CGAAGGTTTGCACACCGACTTCGCCTGTTTGTTGTTCTCG---CACTTGGAGAACAGACC 237552 Query 26064 TTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCN 26123 | || | || | | ||||||| ||| ||||| | |||||||| ||||| Sbjct 237553 AAACCCTGAAATTGTTGAAAAGATCATCACAGAAGCTGTTGGCATCGAGAAAGAGTTCTT 237612 Query 26124 NNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACAT 26183 |||| |||||| | | ||| ||||||| | Sbjct 237613 CACTGACGCTTTACCCGTTTCATTGTTGGGTATGAACGCAAAGTTAATGTGCCAATATGT 237672 Query 26184 TGAGTATGTGGCCGACCATCTGCTG--TGCCAGCTGGGACTCGCCAGA--CTCTACAGTA 26239 || | || || ||| || || ||| |||| | | ||| |||||| | Sbjct 237673 CGAATTCGTAGCTGACAGATTGTTGGTTGC--TTTGGG--TAACAAGAAGGTCTACA--A 237726 Query 26240 CG--CCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTT 26297 || | ||||| || ||||||||||||||||| ||||||| || ||||| |||||||| Sbjct 237727 CGTTACAAACCCATTTGACTTTATGGAAAACATCTCGTTGGCTGGTAAGACAAACTTCTT 237786 Query 26298 TGAAAAGAGGGTCGGCGACTATCAA 26322 |||||||| ||| | ||||| ||| Sbjct 237787 CGAAAAGAGAGTCAGTGACTACCAA 237811 >seq11 Length=2453602 Score = 132 bits (146), Expect = 9e-26 Identities = 479/738 (65%), Gaps = 33/738 (4%) Strand=Plus/Minus Query 25600 TTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTCACC 25659 || || || ||||| |||||||||||||| || |||||||| || ||||| ||| || Sbjct 2212817 TTAGCTTTTTTTGCGGCCTCTGATGGTATTGTCAACGAGAACTTGGTCGAGAACTTCTCC 2212758 Query 25660 AGGGAAGTGC-AGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAAAA 25718 || || | ||| | || |||||||||||||||||||| || || || || || Sbjct 2212757 GCCGAGGTCCAAGTGC-CAGAAGCCAAGTGTTTCTACGGTTTTCAAATTATGATGGAGAA 2212699 Query 25719 TGTGCACTCTGAGGTGTATGCCAAGCTT-CTGATGACGTACATTACAGACGTCGCCGAGA 25777 | |||||||| || | |||| |||| || ||||||| ||| || | | Sbjct 2212698 CATCCACTCTGAAACATACTCATTGCTTATTGAT-ACCTACATTAAGGAC----CCTAAA 2212644 Query 25778 GAGATCGGC----TGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGG 25833 ||| | | ||||| ||| || ||| |||| || | ||| | | |||||| Sbjct 2212643 GAGGCTGACTTTTTGTTTAATGCTATTGAGAACATCCCATGTATCCAAAAGAAGGCTGAC 2212584 Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893 |||||| ||| ||||| || | || |||||| ||| | |||| || || Sbjct 2212583 TGGGCCTTGAGATGGATTAATGATGACGATGCATTGTTTGGTGAGAGATTGGTTGCTTTC 2212524 Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953 || || || || || ||||| || || || || || || | ||||||||| | ||| || Sbjct 2212523 GCAGCCGTTGAAGGTATCTTCTTTAGTGGCTCCTTCGCATCTATCTTCTGGTTGAAGAAG 2212464 Query 25954 AAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGGGTCT 26012 | || ||||| || || ||||| ||||||||| | || || | ||||| ||| | Sbjct 2212463 AGAGGCTTGATGCCTGGTTTG-ACTTTCTCCAACGAGTTGATTTGCCGTGACGAAGGTTT 2212405 Query 26013 CCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACC-TTCTCAAG 26071 |||| || ||||||||| || | | | || || ||| ||| ||| ||| | Sbjct 2212404 GCACACCGACTTTGCCTGCTTGTTGTTCTCG---CATTTGGAGAACAGACCAAACTC-GG 2212349 Query 26072 AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNNN 26131 | | || | | || || | ||| ||||| | ||||| || ||||| Sbjct 2212348 AAATTGTTGAGAAGATTATTACAGAAGCTGTTGTTATCGAAAAAGAGTTCTTCAGTGACG 2212289 Query 26132 NNNNNNNNNNNNNNNNNNTGGGCATGAA--CAACAGACTCATGAGCCAATACATTGAGTA 26189 |||| ||||| ||| || | ||| | ||||| |||| | Sbjct 2212288 CTTTACCAGTTTCATTGTTGGGTATGAATTCAA-AG-TTGATGTGTCAATATGTTGAATT 2212231 Query 26190 TGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGA--CTCTACAGTACG--CCT 26244 |||||| ||| || | ||| ||| | | | ||| |||||| ||| | Sbjct 2212230 TGTGGCTGACAGATTGTTAGTG---GCTTTGGGTAACAAGAAGGTCTACA--ACGTTACA 2212176 Query 26245 AACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAG 26304 ||||| || ||||||||||||||||| ||||||| || ||||| ||||||||||||||| Sbjct 2212175 AACCCATTTGACTTTATGGAAAACATCTCGTTGGCTGGTAAGACAAACTTCTTTGAAAAG 2212116 Query 26305 AGGGTCGGCGACTATCAA 26322 || ||| | || || ||| Sbjct 2212115 AGAGTCAGTGATTACCAA 2212098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844602620480