Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq11 181 2e-40 seq17 132 7e-26 seq10 129 9e-25 >seq11 Length=2453602 Score = 181 bits (200), Expect = 2e-40 Identities = 562/862 (65%), Gaps = 34/862 (4%) Strand=Plus/Plus Query 17860 AGCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATAT 17919 ||| |||| ||| || | |||| | || || ||||| |||||||| || |||| || || Sbjct 2212092 AGCCTTTTGGTAATCACTGACTCTCTTTTCAAAGAAGTTTGTCTTACCAGCCAACGAGAT 2212151 Query 17920 TAAATTCATAAAATCAAATGGATTAGTG--GTTTTATAATATTTTTCTTGTATT--AATT 17975 | |||||| |||||||| || || ||| || | ||||||| || Sbjct 2212152 GTTTTCCATAAAGTCAAATGGGTTTGTAACGTTGTAGACC----TTCTTGTTACCCAAAG 2212207 Query 17976 CGTATAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATAC 18035 | ||| ||||| || || |||||||| |||||||| ||||||| | ||||||||| Sbjct 2212208 CCACTAACAATCTGTCAGCCACAAATTCAACATATTGACACATCAACTTTGAATTCATAC 2212267 Query 18036 CTAGTAGTCTGAAA--GGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTC 18093 | | | | |||| |||| ||| ||| | | || ||||| || || |||||| || Sbjct 2212268 CCAACAAT--GAAACTGGTAAAGCGTCACTGAAGAACTCTTTTTCGATAACAACAGCTTC 2212325 Query 18094 TTTTATTATGTTT------ATTACCCTAGATTTTGGCAATTTATTAATTATGTGATTATA 18147 | | || || || ||| || || ||||| || | | ||| || | | Sbjct 2212326 TGTAATAATCTTCTCAACAATTTCC---GAGTTTGGTCTGTTCTCCAA-ATGCGAGAACA 2212381 Query 18148 ATATAATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACT 18207 | | | || ||||| || ||||| |||||||| || | | | || || ||||| Sbjct 2212382 ACA-----AGCAGGCAAAGTCGGTGTGCAAACCTTCGTCACGGCAAATCAACTCGTTGGA 2212436 Query 18208 AAACGTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACT 18267 || || || || ||||| | ||||| || || | ||| || || |||||||| | Sbjct 2212437 GAAAGTCAAACCAGGCATCAAGCCTCTCTTCTTCAACCAGAAGATAGATGCGAAGGAGCC 2212496 Query 18268 AGAAAAGAATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAA-ACTGTATT 18326 | |||||| ||||| |||||| ||||| || | ||||| ||| |||| | || || Sbjct 2212497 ACTAAAGAAGATACCTTCAACGGCTGCGAAAGCAACCAATCTCTCACCAAACAATGCATC 2212556 Query 18327 TATTGCTCAGTA-TCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTC 18385 | ||| || ||||| | ||||| || | | ||||| || || || Sbjct 2212557 G--TCATCATTAATCCATCTCAAGGCCCAGTCAGCCTTCTTTTGGATACATGGGATGTTC 2212614 Query 18386 TCTATAGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAAC 18445 || ||||||||||||||| || ||||| | || || || || || || || | | Sbjct 2212615 TCAATAGCATTAAACAAAAAGTCAGCCTCTTTAGGGTCCTTAATGTAGGTATCAATAAGC 2212674 Query 18446 AAAGAATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTA 18505 || || || ||||||| || ||| | ||||| || ||||||| || || | | Sbjct 2212675 AATGAGTATGTTTCAGAGTGGATGTTCTCCATCATAATTTGAAAACCGTAGAAACACTTG 2212734 Query 18506 GCCTCGGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCG 18565 || || || ||| | |||| | || | || ||||| ||||| || || ||||| Sbjct 2212735 GCTTCTGGCACTTGGACCTCGGCGGAGAAGTTCTCGACCAAGTTCTCGTTGACAATACCA 2212794 Query 18566 TCAGCAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGA 18625 |||| | || ||||| || || | | ||||||| | |||| || || || | Sbjct 2212795 TCAGAGGCCGCAAAAAAAGCTAAGATACGAGAAATGAAAAATCTTTCGTTCTCATTCATC 2212854 Query 18626 TTGTT---CCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGAT 18682 ||||| ||| |||| | || || || ||| | ||| || | ||||| ||||| Sbjct 2212855 TTGTTTTGCCAGTCATGGGTGTCCTTGCCTAAATCTATTTCCTCGGCAGTCCAGAAAGAA 2212914 Query 18683 GATTCGGCCTGTTTGTACATTT 18704 | ||| |||| ||| ||||||| Sbjct 2212915 GCTTCTGCCTTTTTATACATTT 2212936 Score = 107 bits (118), Expect = 3e-18 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | || || |||||||| || || ||||| || || || || ||| Sbjct 170636 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGTCCTCT 170577 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| ||||| || || || ||||| || || || || || ||||| || Sbjct 170576 GACACCATTGATAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAG 170517 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || |||||||||| ||| |||||||| | || ||| ||||| || || || || || Sbjct 170516 CAGAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTACAAC 170457 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| ||| | || | || ||||| || ||||||||||| ||| Sbjct 170456 AT--CCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTAAGAGGTGGT 170409 >seq17 Length=1373282 Score = 132 bits (146), Expect = 7e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | || || ||||| || || |||||||| |||||||||||| |||| Sbjct 1191856 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACTATTACTTTAGAAGTCGAATCTTCT 1191915 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | |||| || || || ||| || || || || || || || || ||||| ||| Sbjct 1191916 GACACTATTGACAATGTCAAGTCTAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAA 1191975 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||| | || |||||||| | ||||| ||||| ||||| ||||| || Sbjct 1191976 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCCGATTACAAC 1192035 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || | || || || |||||||| ||||| ||| Sbjct 1192036 ATTCAGAAAGAATCCACCTTACACTTGGTCTTAAGATTGAGAGGTGGT 1192083 Score = 98.7 bits (108), Expect = 1e-15 Identities = 164/235 (70%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 155818 ATAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAG 155877 |||| |||||||| || |||| || || ||||| || || || || || || || || Sbjct 1191623 ATAAGATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATCACTTTGGAGGTTGAGT 1191682 Query 155878 ATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAG 155937 ||||| | ||| ||||| || || || || || || ||||| || || |||| Sbjct 1191683 CCTCTGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGTATTCCACCAG 1191742 Query 155938 AACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATT 155997 | || ||||||||||| | || |||||||| | ||||| ||||| ||||| || | Sbjct 1191743 ACCAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCCGACT 1191802 Query 155998 ATAATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 | | | ||||||| ||| | || | || || || || ||||| ||||| ||| Sbjct 1191803 ACA--ACATCCAAAAGGAGTCCACCTTACACTTGGTTTTGAGATTGAGAGGTGGT 1191855 >seq10 Length=3096056 Score = 129 bits (142), Expect = 9e-25 Identities = 170/234 (73%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || |||||||| ||| ||||||| ||||| || || ||||| || || || || || | Sbjct 917760 AAGATGCAAATTTTTGTTAAAACCTTGACAGGTAAGACTATCACCTTGGAGGTGGAGTCT 917701 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || || | ||| || || || || || ||||| || || || || || || || Sbjct 917700 TCCGACACTATCGACAATGTTAAGTCCAAGATTCAAGACAAGGAGGGAATTCCACCTGAC 917641 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 |||||||||||||||| ||| |||||||| | || ||| ||||||||| || || ||| Sbjct 917640 CAACAAAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGCAGAACTTTGTCTGACTAT 917581 Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 | ||||||||| ||| | || | || || || || ||||| ||||| |||| Sbjct 917580 A--ATATCCAAAAGGAGTCTACCTTGCACTTGGTTTTGAGATTGAGAGGTGGTG 917529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731871844477200