Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16]
17 sequences; 21,255,474 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq16 123 2e-23
seq11 114 1e-20
seq17 107 2e-18
>seq16
Length=1434301
Score = 123 bits (136), Expect = 2e-23
Identities = 168/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| || || |||| || | || ||||| ||||| || | || || || | |
Sbjct 508957 GATGCAAATTTTCGTTAAGACCTTGACAGGTAAGACTATCACCTTGGAGGTGGAGTCTTC 509016
Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
|||||| | || |||| ||| | || |||||||||||| || ||||| || || || |
Sbjct 509017 CGACACTATCGACAACGTTAAGTCCAA-GATCCAAGACAAGGAGGGAATCCCACCTGACC 509075
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
|||| | ||||| ||||| || || || |||||||| |||| | |||| || || |
Sbjct 509076 AACAGAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTACA 509135
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933
|||| |||||||| || || | |||||||| ||| ||||| | || || ||
Sbjct 509136 ACATCCAAAAGGAGTCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGGTGG 509187
>seq11
Length=2453602
Score = 114 bits (126), Expect = 1e-20
Identities = 167/236 (71%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 24695 ATTGATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTA 24754
|| |||| |||||| || || |||| || ||||| ||||| || || || | || ||
Sbjct 171329 ATAGATAAGATGCAAATTTTCGTTAAGACCCTAACTGGTAAGACCATCACTTTGGAGGTT 171270
Query 24755 GAAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCT 24814
|| || | ||||| | || | || || |||||||||||||| || || || ||
Sbjct 171269 GAGTCCTCTGACACCATTGATAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCA 171210
Query 24815 CCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCA 24874
|| || || || | ||||| ||||| || || || |||||||| |||| | ||||
Sbjct 171209 CCAGACCAGCAGAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCT 171150
Query 24875 GATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| |||||||| || || | ||||| || ||| ||||| | || ||
Sbjct 171149 GACTACAACATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTGAGAGGTGG 171094
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || | || ||||| || ||||| | || || || || |
Sbjct 171092 ATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGTCCTCT 171033
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 171032 GACACCATTGATAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAG 170973
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | || || ||||| || || || |||||||| |||| | |||| || || |||
Sbjct 170972 CAGAGATTAATTTTTGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTACAAC 170913
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| |||||||| || || | ||||| || ||| ||||| | || ||
Sbjct 170912 ATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTGAGAGGTGG 170866
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | || || | || ||||| || ||||| | || || || || |
Sbjct 170636 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGTCCTCT 170577
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 170576 GACACCATTGATAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAG 170517
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||| ||||| || || || |||||||| |||| | |||| || || |||
Sbjct 170516 CAGAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTACAAC 170457
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
|| |||||||| || || | ||||| || ||| ||||
Sbjct 170456 ATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATT 170419
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | || || | || ||||| || ||||| | || || || || |
Sbjct 170864 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGTCCTCT 170805
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 170804 GACACCATTGATAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAG 170745
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||| || || || || || |||||||| |||| | |||| || || |||
Sbjct 170744 CAGAGATTGATTTTCGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTACAAC 170685
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| |||||||| || || | ||||| || ||| ||||| | || ||
Sbjct 170684 ATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTGAGAGGTGG 170638
Score = 82.4 bits (90), Expect = 7e-11
Identities = 135/189 (71%), Gaps = 7/189 (4%)
Strand=Plus/Plus
Query 139409 TCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGC-CTTCTTATCTTCC 139467
||||||||| ||| ||||||||||| || | |||||| | || ||| || ||||||
Sbjct 2098408 TCATGAACAAATCAGGAATCCACAATGCCGGGAACAAATCTCTAGCTCTTATT-TCTTCC 2098466
Query 139468 GAACCCATGTTACGTT-TCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAG 139526
| ||||| | | || | |||| || ||||||||| | ||| ||||||||||| ||||
Sbjct 2098467 TTA-CCATGGTTCTTTCTGATGTCAATGAAATCAAAGATGTCGGCGTGCCATGGCTCCAA 2098525
Query 139527 ATAGATGGCCATTGCGCC---TTTCCGTTTGCCACCTTGATCGACGTGTCGTACAGCATT 139583
|||| ||| | || || | || || |||||||| || || | || ||| ||
Sbjct 2098526 GTAGAGGGCGAAAGCACCGGGTCTCTTATTACCACCTTGGTCAACATAACGAGCAGTGTT 2098585
Query 139584 ATTGAATAC 139592
||||| ||
Sbjct 2098586 GTTGAACAC 2098594
>seq17
Length=1373282
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || | |||||||| |||||||| | || || || || |
Sbjct 1192084 ATGCAGATTTTCGTCAAGACCTTGACCGGTAAGACTATTACCTTGGAGGTTGAGTCCTCT 1192143
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| || || || || || || |||
Sbjct 1192144 GACACCATTGACAACGTCAAGTCTAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAA 1192203
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | || || ||||| || || ||| |||| || |||| | | || || || |||
Sbjct 1192204 CAGAGATTAATTTTTGCTGGTAAGCAGTTGGAAGACGGTAGAACCTTATCCGACTACAAC 1192263
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| |||||||| || || | |||||||| ||| ||||| | || ||
Sbjct 1192264 ATCCAAAAGGAGTCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 1192310
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897504396760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |