Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq10 127 2e-24 seq16 122 7e-23 seq17 96.9 3e-15 seq11 96.9 3e-15 >seq10 Length=3096056 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || |||||||||||||| ||||| || ||||| || || || ||| | || |||| || Sbjct 917760 AAGATGCAAATTTTTGTTAAAACCTTGACAGGTAAGACTATCACCTTGGAGGTGGAGTCT 917701 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 ||| ||| ||| | | || || |||||| || || || || | || || Sbjct 917700 TCCGACACTATCGACAATGTTAAGTCCAAGATTCAAGACAAGGAGGGAATTCCACCTGAC 917641 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 || || ||| | |||| ||| ||||| || ||||||| | || ||| || | ||||| Sbjct 917640 CAACAAAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGCAGAACTTTGTCTGACTAT 917581 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || |||||||||||||| |||||| |||| ||||||||| |||| || Sbjct 917580 AATATCCAAAAGGAGTCTACCTTGCACTTGGTTTTGAGATTGAGAGGTGG 917531 >seq16 Length=1434301 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||||||||| || || || || ||||| || || || ||| | || |||| || Sbjct 508955 AAGATGCAAATTTTCGTTAAGACCTTGACAGGTAAGACTATCACCTTGGAGGTGGAGTCT 509014 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 ||| ||| ||| | | || || ||||| || || || || | || || Sbjct 509015 TCCGACACTATCGACAACGTTAAGTCCAAGATCCAAGACAAGGAGGGAATCCCACCTGAC 509074 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 || |||||| | |||| ||| ||||| || ||||||| | || ||| || | |||||| Sbjct 509075 CAACAGAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTAC 509134 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| ||||||||||| || |||||| |||| ||||||||| |||| || Sbjct 509135 AACATCCAAAAGGAGTCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 509184 >seq17 Length=1373282 Score = 96.9 bits (106), Expect = 3e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 107670 GATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGAC 107729 || || |||||| | |||| ||| ||||| ||| |||| |||| | ||| | | ||| Sbjct 1192198 GACCAACAGAGATTAATTTTTGCTGGTAAGCAGTTGGAAGACGGTAGAACCTTATCCGAC 1192257 Query 107730 TACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAA 107785 |||||||| ||||||||||| || |||||| |||| ||||||||| |||| || || Sbjct 1192258 TACAACATCCAAAAGGAGTCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGGTAA 1192313 >seq11 Length=2453602 Score = 96.9 bits (106), Expect = 3e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 107670 GATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGAC 107729 || ||||||||| | |||| ||| ||||| || ||||||| | | ||| || | ||| Sbjct 170978 GACCAGCAGAGATTAATTTTTGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGAC 170919 Query 107730 TACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||||| ||||||||||| || |||||| | || ||||||||| |||| || Sbjct 170918 TACAACATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTGAGAGGTGG 170866 Score = 96.9 bits (106), Expect = 3e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 107670 GATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGAC 107729 || ||||||||| | |||| ||| ||||| || ||||||| | | ||| || | ||| Sbjct 171206 GACCAGCAGAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGAC 171147 Query 107730 TACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||||| ||||||||||| || |||||| | || ||||||||| |||| || Sbjct 171146 TACAACATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTGAGAGGTGG 171094 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| ||||| ||||| || || || || |||||| | || ||| | Sbjct 170636 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGTCCTCT 170577 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| || || || || | || || ||| Sbjct 170576 GACACCATTGATAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAG 170517 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 |||||| | |||| ||| ||||| || ||||||| | | ||| || | ||||||||| Sbjct 170516 CAGAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTACAAC 170457 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAA 107785 || ||||||||||| || |||||| | || |||||||| |||| || || Sbjct 170456 ATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTAAGAGGTGGTAA 170407 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| ||||| ||||| || || || || |||||| | || ||| | Sbjct 170864 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGTCCTCT 170805 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| || || || || | || || ||| Sbjct 170804 GACACCATTGATAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAG 170745 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 |||||| | |||| || ||||| || ||||||| | | ||| || | ||||||||| Sbjct 170744 CAGAGATTGATTTTCGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTACAAC 170685 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || ||||||||||| || |||||| | || ||||||||| |||| || Sbjct 170684 ATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTGAGAGGTGG 170638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876717357713