Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq17 174 3e-38 seq10 163 6e-35 seq11 147 4e-30 >seq17 Length=1373282 Score = 174 bits (192), Expect = 3e-38 Identities = 176/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | | || ||||| | || ||||||||||| || || ||||| | Sbjct 1192084 TACCACCTCTCAATCTTAAGACCAAGTGTAAGGTGGATTCTTTCTGAATGTTGTAATCGG 1192025 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| ||||||||||||| | ||| || ||||| ||||| | ||||||||| ||||| | Sbjct 1192024 ATAAGGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCTGGTG 1191965 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| || || ||||| | || ||||| ||||| || ||| || ||| | Sbjct 1191964 GAATACCCTCCTTGTCCTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGA 1191905 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| ||||| || ||||| |||||||| ||||| || || || ||||| Sbjct 1191904 CTTCTAAAGTAATAGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 1191856 Score = 147 bits (162), Expect = 4e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | || || ||||||| || || || || || || || || || | Sbjct 1192312 TACCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCGG 1192253 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| ||||||||||||| | || || |||||||| |||| ||| ||||| ||||| | Sbjct 1192252 ATAAGGTTCTACCGTCTTCCAACTGCTTACCAGCAAAAATTAATCTCTGTTGGTCTGGTG 1192193 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| ||||| ||||| | || || || ||||| || ||| | || | Sbjct 1192192 GAATACCCTCCTTGTCTTGGATCTTAGACTTGACGTTGTCAATGGTGTCAGAGGACTCAA 1192133 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || || ||||| || ||||| ||||| || || |||||||| Sbjct 1192132 CCTCCAAGGTAATAGTCTTACCGGTCAAGGTCTTGACGAAAATCTGCAT 1192084 Score = 143 bits (158), Expect = 5e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | || ||| ||||| | || || || || || || || || || | Sbjct 1191856 TACCACCTCTCAATCTCAAAACCAAGTGTAAGGTGGACTCCTTTTGGATGTTGTAGTCGG 1191797 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| ||||||||||||| | ||| || ||||| ||||| | |||||| || ||||| | Sbjct 1191796 ATAAGGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGTG 1191737 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| || || ||||| | || || || ||||| || ||| | || | Sbjct 1191736 GAATACCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCAA 1191677 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||||||| || ||||| || || || ||||| || || || ||||| Sbjct 1191676 CCTCCAAAGTGATGGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCAT 1191628 >seq10 Length=3096056 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| |||||||| | || ||| ||||||| ||||| || || || |||||||| ||||| Sbjct 917530 ACCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATATTATAGTCAGA 917589 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | | |||| || || || | ||| || |||||||| || | ||||||||| || || || Sbjct 917590 CAAAGTTCTGCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGG 917649 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 ||||| ||||| ||||||||||| | || ||||| || || || || || || || Sbjct 917650 AATTCCCTCCTTGTCTTGAATCTTGGACTTAACATTGTCGATAGTGTCGGAAGACTCCAC 917709 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || ||||| |||||||| || || ||||| || ||||| Sbjct 917710 CTCCAAGGTGATAGTCTTACCTGTCAAGGTTTTAACAAAAATTTGCAT 917757 >seq11 Length=2453602 Score = 147 bits (162), Expect = 4e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | || ||||||||||| ||| || || || || || || || |||| Sbjct 170864 TACCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAG 170923 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | |||| || || || | ||| || |||||||| |||| ||| || || ||||| | Sbjct 170924 ACAAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATTAATCTCTGCTGGTCTGGTG 170983 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| ||||| ||||| | || || || ||||| || ||| | || | Sbjct 170984 GAATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAA 171043 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || || ||||| || ||||| ||||| || || |||||||| Sbjct 171044 CCTCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 171092 Score = 138 bits (152), Expect = 2e-27 Identities = 185/254 (73%), Gaps = 5/254 (2%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | || ||||||||||| ||| || || || || || || || |||| Sbjct 171092 TACCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAG 171151 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | |||| || || || | ||| || |||||||| || | ||| || || ||||| | Sbjct 171152 ACAAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGTG 171211 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| ||||| ||||| | || || || ||||| || ||| | || | Sbjct 171212 GGATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAA 171271 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCA--TTAT-TATAT 82818 | |||||||| || ||||| || || | ||||| || || || |||| |||| ||||| Sbjct 171272 CCTCCAAAGTGATGGTCTTACCAGTTAGGGTCTTAACGAAAATTTGCATCTTATCTATAT 171331 Query 82819 TTT--TCTACTAAA 82830 | | | ||||||| Sbjct 171332 TATACTTTACTAAA 171345 Score = 134 bits (148), Expect = 3e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| || | || ||||||||||| ||| || || || || || || || |||| Sbjct 170408 TACCACCTCTTAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAG 170467 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | |||| || || || | ||| || |||||||| || | ||| || || ||||| | Sbjct 170468 ACAAGGTTCTTCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGTG 170527 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| ||||| ||||| | || || || ||||| || ||| | || | Sbjct 170528 GGATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAA 170587 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || || ||||| || ||||| ||||| || || || ||||| Sbjct 170588 CCTCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 170636 Score = 134 bits (148), Expect = 3e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | || ||||||||||| ||| || || || || || || || |||| Sbjct 170636 TACCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAG 170695 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | |||| || || || | ||| || ||||| || || | ||| || || ||||| | Sbjct 170696 ACAAGGTTCTTCCATCCTCCAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTG 170755 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| ||||| ||||| | || || || ||||| || ||| | || | Sbjct 170756 GGATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAA 170815 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || || ||||| || ||||| ||||| || || || ||||| Sbjct 170816 CCTCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 170864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826986145763