Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq2 168 2e-36 seq11 167 6e-36 seq10 127 5e-24 seq13 113 1e-19 seq14 111 4e-19 seq12 109 1e-18 seq1 98.7 2e-15 seq3 93.3 1e-13 >seq2 Length=1085221 Score = 168 bits (186), Expect = 2e-36 Identities = 526/803 (66%), Gaps = 11/803 (1%) Strand=Plus/Plus Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 ||||||||||||||| || || | | ||||| | ||||| || ||| | ||||| | Sbjct 351671 GAACGTCCTCAACACTTGATTATGAGAGTTGCAGTCGGTATACACGGAGAAGATATCCCA 351730 Query 110424 GCTGTTATTGAATGTTATGATGT-ATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTAC 110482 ||||| ||| ||||| | | || | ||| | || ||| | | |||| || Sbjct 351731 AGAGTTATCGAAAGTTATAACTTGATGTCGCAAAGATTCTT-TACTCACGGTTCTCCAAC 351789 Query 110483 CCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATTA 110541 | | ||||| || || ||| | ||| || | || || |||||| | | || | Sbjct 351790 CTTGTTTAATGCTGGTACTCCTCTTCCTCAAATGTCATCCTG-TTTCTTGGTTGCCATGA 351848 Query 110542 ACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC-TGCTCTTATTTCTAAA 110600 | || ||||| || || ||||| || ||| || ||||||| |||| | ||||| ||| Sbjct 351849 AGGAGGATTCCATCGACGGTATCTACGATACT-TTAAAGACTTGTGCTTTGATTTCAAAA 351907 Query 110601 AACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCA 110660 | | | || || |||||| | ||| | || | ||||| ||| || || | || || Sbjct 351908 AGCGCCGGTGGTATTGGTTTGCACATCCACAACATTCGTGCAACTGGTGCTTACATTGCT 351967 Query 110661 ACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCA 110720 | || ||| |||||| || | |||| ||| | ||||| |||||| |||| || Sbjct 351968 GGTACTAACGGTACTTCAAACGGTATCATTCCTATGGTCAGAGTGTTCAACAACACAGCT 352027 Query 110721 AAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCT 110777 ||||| | |||||||| ||||||| || | ||||| |||| | || || Sbjct 352028 CGTTATGTTGACCAAGGTGGTAATAAGAGACCCGGTGCTTTTGCCCTCTACTTGGAGCCA 352087 Query 110778 TGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAA 110837 ||||| | ||||| ||||| ||| | || | | || || || || |||||| | Sbjct 352088 TGGCACGCTGATATCTTTGATTTCATTGACATCAGAAAGAACCACGGTAAGGAAGAAATA 352147 Query 110838 AGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAA 110897 ||||| | ||||| || ||| | |||||| | ||||| ||||||||| | ||| || Sbjct 352148 AGAGCTAGAGATTTGTTCCCAGCATTATGGATTCCTGATTTGTTCATGAAAAGAGTTGAA 352207 Query 110898 GAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATAT 110957 |||| || ||| || | | | |||| | | | ||| |||||||||| || Sbjct 352208 CAAAACGGTGACTGGACTTTATTTTCTCCTAACGAAGCAACAGGTTTATCTGATGTCTAC 352267 Query 110958 GGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGT-TTCGCAAACA 111016 || | || || ||||| | ||| ||||||||||| ||||| | || |||| Sbjct 352268 GGTGATGAATTCGAAGAGTTGTACACTAAATATGAAAAGGAAGG-ACGTGGTCGCTCGAC 352326 Query 111017 AATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCC 111076 || || ||| || | |||| | || | ||| ||||| ||| ||||| ||||| Sbjct 352327 TGTTAAGGCCCAAAAATTATGGTACTCTATTTTGGAAGCACAAACTGAGACTGGTACTCC 352386 Query 111077 TTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAAT 111136 || || ||||| |||||| | ||| ||| | || || | |||| | || | || Sbjct 352387 TTTCATGTTGTACAAAGATGCTTGTAACAAGAAAACAAACCAGAAGAATCTTGGTATTAT 352446 Query 111137 TAAGTCTAGTAATTTGTGCTGTG 111159 || ||| ||| || || |||| Sbjct 352447 CAAATCTTCTAACTTATGTTGTG 352469 >seq11 Length=2453602 Score = 167 bits (184), Expect = 6e-36 Identities = 418/629 (66%), Gaps = 11/629 (2%) Strand=Plus/Minus Query 110538 ATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTT--ATTT 110595 || || || ||||||||||| |||||||| ||| | |||||| || ||| ||| |||| Sbjct 2098759 ATGAAGGAGGATTCTATTGACGGTATTTACGATAC-CTTAAA-AACCTGTGCTTTAATTT 2098702 Query 110596 CTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATA 110655 | || | | | || || |||||| | ||| |||| | ||||| | | || || | | Sbjct 2098701 CAAAGAGCGCCGGTGGCATTGGTTTGCACATTCACAACATTCGTGCGACTGGTGCTTACA 2098642 Query 110656 TCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACA 110715 | || | || ||| |||||| |||| | |||| ||| | ||||| |||||| ||| Sbjct 2098641 TTGCTGGTACTAACGGTACTTCAAATGGAATCATTCCTATGGTCAGAGTGTTCAACAACA 2098582 Query 110716 CTGCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCG 110772 |||| ||||| | |||||||| ||||||| || | || || |||| | | Sbjct 2098581 CTGCTCGTTATGTTGACCAAGGTGGTAATAAGAGACCCGGTGCTTTCGCCCTCTACTTGG 2098522 Query 110773 AACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAG 110832 | || ||||| | || || ||||| ||| | || | | || || || || |||| Sbjct 2098521 AGCCATGGCACGCCGACATCTTTGATTTCATTGACATCAGAAAGAACCATGGTAAGGAAG 2098462 Query 110833 AACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTG 110892 || |||||| | ||||| || ||| |||||||| | ||||| ||||||||| | | Sbjct 2098461 AAATAAGAGCTAGAGATTTGTTCCCGGCATTGTGGATTCCTGATTTGTTCATGAAAAGAG 2098402 Query 110893 TTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATG 110952 || || |||| || ||| || | | | |||| || | | ||| ||||||||| Sbjct 2098401 TTGAACAAAACGGTGATTGGACTTTATTTTCTCCTAATGAAGCAACAGGTTTATCTGATG 2098342 Query 110953 TATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCA 111012 | ||||| | || || ||||| | || | ||||||||| ||||| |||| Sbjct 2098341 TCTATGGTGATGAATTCGAAGAGTTGTATACTAGATATGAAAAGGAAGGGCGTGGTCGC- 2098283 Query 111013 AACAAATTCCA--GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGG 111070 | | | || |||||| || | |||| ||| | || | ||| ||| ||||| Sbjct 2098282 -TCGACTGTCAAGGCTCAAAAATTATGGTATTCTATCTTGGAGGCGCAAACTGAGACTGG 2098224 Query 111071 AACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGG 111130 || || | || ||||| |||||| | || ||| | || |||| |||| | || Sbjct 2098223 TACACCATTCATGTTGTACAAAGATGCTTGCAACAAGAAAACAAACCAAAAGAATCTTGG 2098164 Query 111131 AACAATTAAGTCTAGTAATTTGTGCTGTG 111159 ||||| ||| ||| |||||||||| Sbjct 2098163 TGTTATTAAATCTTCTAACTTGTGCTGTG 2098135 >seq10 Length=3096056 Score = 127 bits (140), Expect = 5e-24 Identities = 406/624 (65%), Gaps = 13/624 (2%) Strand=Plus/Plus Query 110542 ACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAA-CTGCTCTTATTTCTAAA 110600 |||||||||| || || || || ||| | | ||| | ||| | || | ||||| ||| Sbjct 1732375 ACGATGATTCAATAGATGGAATCTATAAGAC-CTTGCACAAAGCAGCAATGATTTCAAAA 1732433 Query 110601 AACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCA 110660 || || |||||||| ||||| || ||| |||| | |||| | | || ||| Sbjct 1732434 GCTTCCGGTGGAATTGGCATTCATGTACATAATATAAGAGGCGAAGGCTCCAGGATAGCA 1732493 Query 110661 ACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCA 110720 | || | || | | ||| | || || |||||| | || ||||| ||||||| Sbjct 1732494 AGTTCGGAAGGAACAAGTAGTGGCTTGGTGCCTATGTTACGTGTGTTCAATAACACTGCC 1732553 Query 110721 AAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCT 110777 | ||| || |||||||||| ||||||| ||| | ||||| || ||||| ||||| Sbjct 1732554 AGATACGTTGATCAAGGTGGGAATAAGAGACCTGGGGCGTTTGCGATTTATCTTGAACCA 1732613 Query 110778 TGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAA 110837 ||||||||||| || || | || || | || || || || ||||| | Sbjct 1732614 TGGCATTCAGACATTTTCTCGGTATTGGAGTTGAAAAAGAACCACGGCAAGGAAGAGTTA 1732673 Query 110838 AGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAA 110897 ||||| | || ||||||||| | | ||||| | ||| | || ||| | | ||| || Sbjct 1732674 CGAGCAAGAGACCTATTTTATGGATTATGGATACCCGATCTTTTTATGCATAGAGTTAAA 1732733 Query 110898 GAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATAT 110957 ||||| ||||||||| | | | || || | ||||||| || || ||| Sbjct 1732734 GAAAACTTAGACTGGTCTCTTTTTTCTTCTGATACTGCTCCTGGATTAAGCGAGTGCTAT 1732793 Query 110958 GGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAA 111017 || |||| ||| | | ||||| || ||||| |||||||| || | |||| ||| Sbjct 1732794 GGGGAAGAATTTAACGCACTTTATGAGAAATACGAAAAAGA----AAATAGAGCAATCAA 1732849 Query 111018 A--TTCCA--GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAAC 111073 | | || || ||| ||||||| ||| | || || || |||| || || Sbjct 1732850 AGTTGTCAAGGCACAAAGACTTTGGCATGCTATCTTGGAGTCTCAGATTGAGACAGGGGG 1732909 Query 111074 TCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAAC 111133 |||||||| | ||||| || | ||||| ||||| || |||| || || || || Sbjct 1732910 CCCTTATATGCTATATAAGGACTCTTGTAATCAAAAATCAAACCAAAGAAACTTGGGTAC 1732969 Query 111134 AATTAAGTCTAGTAATTTGTGCTG 111157 || || || |||||| ||||| Sbjct 1732970 TATAAAATCATCTAATTTATGCTG 1732993 >seq13 Length=1924819 Score = 113 bits (124), Expect = 1e-19 Identities = 199/292 (68%), Gaps = 7/292 (2%) Strand=Plus/Plus Query 167642 ATCGATGAAACTTTTCCAGATTTTTATCGAACCACGTCGTTTGCATTCATCGTAAAAACC 167701 ||| ||||| ||||| ||||||| || ||| |||||||||||||| ||||| || Sbjct 680729 ATCAATGAATAACTTCCACGTTTTTATATTACAACGGCGTTTGCATTCATCATAAAACCC 680788 Query 167702 ATAGTCTCTTGAGATATCAGCACATTCGTGATTTCCTCTTAATAAAATTATGTTATTTNN 167761 ||| ||| || | || |||||||| |||||||| |||||||||| | ||| | Sbjct 680789 ATAAACTCGTGTCACATTCGCACATTCATGATTTCCCCTTAATAAAAAAAAGTTTTCAGG 680848 Query 167762 NNNNNNNNNNNTGTAGCAAAATAATAACAAAATTGTTTCTAATGATTTAACACCTCTATC 167821 | ||||| |||| | || || ||||||| ||||| ||||| || Sbjct 680849 ATATTTTATTTTATAGCATAATAGAAGTAAGATGGTTTCTAGTGATTGCTTTCCTCTGTC 680908 Query 167822 AACATAATCACCTAAAAATATATATTTATTTTGGTTTGA--AGGATTATCTAGTTTTTTA 167879 |||||||||||| | ||||| ||| |||| || ||| |||| | ||| | Sbjct 680909 AACATAATCACCAAGAAATAAATA---ATTT--GTCTGAGGAGGAAACCCGCATTTCGTG 680963 Query 167880 AAAATATTCAATAAATCACTAAATTGACCATGTAAATCACCTACAACCTTTA 167931 |||| | | ||||||| | | |||||||||| ||| || || || |||| Sbjct 680964 AAAACACGAATCAAATCACCATACTGACCATGTACATCGCCAACTACTTTTA 681015 >seq14 Length=1898770 Score = 111 bits (122), Expect = 4e-19 Identities = 191/279 (68%), Gaps = 7/279 (3%) Strand=Plus/Plus Query 167655 TTCCAGATTTTTATCGAACCACGTCGTTTGCATTCATCGTAAAAACCATAGTCTCTTGAG 167714 ||||| ||||||| || ||| |||||||||||||| ||||| ||||| ||| || Sbjct 676124 TTCCACGTTTTTATATTACAACGGCGTTTGCATTCATCATAAAACCCATAAACTCGTGTC 676183 Query 167715 ATATCAGCACATTCGTGATTTCCTCTTAATAAAATTATGTTATTTNNNNNNNNNNNNNTG 167774 | || |||||||| ||||| ||||||||||||| | || | | Sbjct 676184 ACATTCGCACATTCATGATTCCCTCTTAATAAAAAAAAATTTTCAGGGTATTTTATCTTA 676243 Query 167775 TAGCAAAATAATAACAAAATTGTTTCTAATGATTTAACACCTCTATCAACATAATCACCT 167834 ||||| |||| | || || ||||||| ||| | ||||| ||||| |||||||| Sbjct 676244 TAGCATAATAGAAGTAAGATGGTTTCTAGTGACTGTTTTCCTCTGTCAACGTAATCACCA 676303 Query 167835 AAAAATATATATTTATTTTGGTTTGA--AGGATTATCTAGTTTTTTAAAAATATTCAATA 167892 | ||||| ||| |||| || ||| |||| | | ||| |||||| | | || Sbjct 676304 AGAAATAAATA---ATTT--GTCTGAGGAGGAAAACCACATTTCGTAAAAACACGAATTA 676358 Query 167893 AATCACTAAATTGACCATGTAAATCACCTACAACCTTTA 167931 |||||| | |||||||||| | ||| || || || |||| Sbjct 676359 AATCACCATATTGACCATGAACATCGCCAACTACTTTTA 676397 >seq12 Length=1983291 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368 ||||| | || ||||| |||| | |||||| | || |||||| |||| || |||||| Sbjct 149887 CATTTAATGGATAATGACCCGGTTTTATTCAATCGTCAGCCATCATTGCACAAGATGTCT 149946 Query 305369 ATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCT 305428 |||||| | || | ||| || || | || | ||||||| || | ||| || || Sbjct 149947 ATGATGTCGCACAGAGTGAAGGTTATGCCTTACTCGACATTTAGACTTAATTTATCTGTC 150006 Query 305429 TGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCA 305488 | | || |||||||| ||||||||||| |||||||||||| | || || |||||||| Sbjct 150007 ACTTCCCCATATAATGCTGATTTTGATGGTGATGAAATGAATTTACACGTTCCTCAATCT 150066 Query 305489 AAGGTTACAATGACTGAATTATCAGAAATATGT 305521 | || | | |||||||| ||||| ||| Sbjct 150067 CCCGAAACCAGAGCAGAATTATCCGAAATTTGT 150099 >seq1 Length=3185900 Score = 98.7 bits (108), Expect = 2e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 305330 GTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAA 305389 ||| | || ||| | || ||||| |||| ||||||||||||||||| || | ||| || Sbjct 2887138 GTTTTATTTAATCGTCAGCCATCTTTGCACAAAATGTCTATGATGGCACACAGAGTTAAG 2887079 Query 305390 GTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGAT 305449 || | || | ||||| || | ||| || || | | || |||||||| || Sbjct 2887078 GTTATGCCTTACTCAACATTCAGACTTAATTTATCTGTCACTTCTCCGTATAATGCTGAC 2887019 Query 305450 TTTGATGGAGATGAAATGAATATGCATGTACCTCAATCAAAGGTTACAATGACTGAATTA 305509 |||||||| |||||||||||| |||| || ||||| || | || | | |||||| Sbjct 2887018 TTTGATGGCGATGAAATGAATTTGCACGTTCCTCAGTCTCCCGAAACCAGAGCAGAATTA 2886959 Query 305510 TCAGAAATATGTTCTGT 305526 |||||||| ||| |||| Sbjct 2886958 TCAGAAATTTGTGCTGT 2886942 >seq3 Length=1039617 Score = 93.3 bits (102), Expect = 1e-13 Identities = 169/244 (69%), Gaps = 10/244 (4%) Strand=Plus/Minus Query 279854 CGTTCTATTCCTCATTTAATGGATGGTTTGAAACCT--TCACAGCGTAAGATTATATTCA 279911 ||||| |||||| | || ||||||| |||||||| ||| || | | | ||| || Sbjct 973806 CGTTCCATTCCTTCTGTATTGGATGGCTTGAAACCGGGTCAAAGAAAAGTACTCTATGCA 973747 Query 279912 GTTGTTTCAAAAGAAAATTGGTAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTT 279971 ||||||| |||||| ||| || || || |||| | || |||||||||| Sbjct 973746 --TGTTTCAGAAGAAACTTGACTGTTGATATCAAAGTAAGTCAGCTTGCTGGTTATGTTT 973689 Query 279972 CAGAACATGCAGGTTATCATCACGGTGAAGCGTC---TCTTCAAGGTGCTATTGTAGGTC 280028 | || || |||| || || |||||||| || || | ||||| |||| ||||| Sbjct 973688 CTGAGAATACAGGGTACCACCACGGTGAGGCTTCACTTGTTCAA---ACTATCATAGGTT 973632 Query 280029 TTGCCCAAGATTTTATGGCTTCAAACAACTTAAATCTGCTTTCACCAAATGGTCAATTTG 280088 | || || |||||||| | ||||| ||||| || | ||| ||||| |||| ||||| Sbjct 973631 TAGCACAGGATTTTATTGGGTCAAATAACTTGAACGTTCTTAAACCAATTGGTACATTTG 973572 Query 280089 GTTC 280092 |||| Sbjct 973571 GTTC 973568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812541497337