Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq11 129 6e-25 seq2 100 3e-16 >seq11 Length=2453602 Score = 129 bits (142), Expect = 6e-25 Identities = 329/496 (66%), Gaps = 6/496 (1%) Strand=Plus/Minus Query 53210 GGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGACTTAATGAGCCAAAAG 53269 ||||| ||||||||||| | | | || | || | || |||| ||| |||| Sbjct 2098897 GGTATACACGGTGACGATATCCCAAGAGTGCTCGAAAGTTATAACTTGATGTCGCAAAGA 2098838 Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329 | || || |||| | ||||| ||||||| |||||||| || ||||| ||||| Sbjct 2098837 TTTTTCACTCACGGTTCTCCAACTTTGTTCAATGCTGGTACTCCTCTGCCTCAAATGTCA 2098778 Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389 ||| ||| |||| || |||||||| || || || ||||| || ||||| || | || Sbjct 2098777 TCCTGTTTCTTGGTTGCTATGAAGGAGGATTCTATTGACGGTATTTACGATACCTTAAAA 2098718 Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCCG 53448 ||||| || || ||| | | ||||| || ||| | ||| | | | ||| | || Sbjct 2098717 ACCTGTGCTTTAATTTCAAAGAGCGCCGGTGGCATTGGTTTGCACATTCAC-AACATTCG 2098659 Query 53449 TGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCT 53508 ||||| || | || || || ||||| | |||||||| | |||||| | Sbjct 2098658 TGCGACTGGTGCTTACATTGCTGGTACTAACGGTACTTCAAATGGAATCATTCCTATGGT 2098599 Query 53509 CCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTC 53568 | | || ||||||||||| || || || || |||| |||||| ||| | || | Sbjct 2098598 CAGAGTGTTCAACAACACTGCTCGTTATGTTGACCAAGGTGGTAATAAGAGACCCGGTGC 2098539 Query 53569 GTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCT 53628 |||||| ||||| | ||||| |||||||||||||| | || || | || | | Sbjct 2098538 TTTCGCCCTCTACTTGGAGCCATGGCACGCCGACATCTTTGATTTCATTGACATCAGAAA 2098479 Query 53629 GAATCAGGGTGACGAAGAGAT--GCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCG 53686 ||| || ||| | ||||| || | ||| | || |||| | || |||||||||| Sbjct 2098478 GAACCATGGTAAGGAAGAAATAAGAGCT--AGAGATTTGTTCCCGGCATTGTGGATTCCT 2098421 Query 53687 GACCTCTTCATGCAAA 53702 || | |||||| ||| Sbjct 2098420 GATTTGTTCATGAAAA 2098405 >seq2 Length=1085221 Score = 100 bits (110), Expect = 3e-16 Identities = 277/418 (66%), Gaps = 9/418 (2%) Strand=Plus/Minus Query 74763 TGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCA 74822 ||| | ||||| || | || ||||| || || || || | | |||||||| | || Sbjct 237507 TGCAAACCTTCGTCACGGCAGATCAACTCGTTAGAGAAGGTCAAACCAGGCATCAAGCCT 237448 Query 74823 CGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACAC 74882 | |||||||||||| ||||| | ||||||||||||||||||||| ||||| ||| | Sbjct 237447 CTCTTCTTCAACCAGAAGATAGATGCGAAGGAACCACTGAAGAAGATACCTTCAACAGCC 237388 Query 74883 GCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAA---GTCATCCAAGTCTGAGCC 74939 || || || || | | | ||||| ||||||| | | ||||| || ||| Sbjct 237387 GCGAAAGCAACCAATCTCTCACCGAACAATGCATCGTCATCGTTGATCCATCTCAAGGCC 237328 Query 74940 CATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCTTGGA--AGAGGCTTGCC 74996 || ||||| ||| ||||| ||| |||| | ||||| || | | | | | | | Sbjct 237327 CAGTCAGC-CTTCTTTTGAATGCATGGGATGTTCTCGATGGCGTTAAACAAAAAGTCGGC 237269 Query 74997 TTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATC 75056 || ||| ||| ||||| | | ||||||| | | |||||| ||||| || || || Sbjct 237268 CTC-CTTAGGG-TCCTTAATGTAGGTGTCAATAAGCAATGAGTATGTCTCAGAGTGGATA 237211 Query 75057 GACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTT 75116 ||| | | |||| | |||||||| || || |||| | || || || Sbjct 237210 TTCTCCATCATAATCTGGAAACCGTAGAAACACTTGGCTTCTGGGACTTGGACCTCAGCG 237151 Query 75117 GAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCA 75174 || || ||| | | | ||||| |||| || || || ||||| ||||| ||||||| Sbjct 237150 GAGAAGTTCTCGACCAAGTTCTCATTGACAATACCATCAGAGGCAGCGAAGAAAGCCA 237093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215883716600