Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq17 154 2e-32 seq11 154 2e-32 seq10 125 8e-24 seq16 118 1e-21 seq15 89.7 6e-13 >seq17 Length=1373282 Score = 154 bits (170), Expect = 2e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| | ||||| ||||||||||| | ||||||||||| | Sbjct 1192084 ATGCAGATTTTCGTCAAGACCTTGACCGGTAAGACTATTACCTTGGAGGTTGAGTCCTCT 1192143 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| |||| || || ||||||||||| ||||| |||||||| Sbjct 1192144 GACACCATTGACAACGTCAAGTCTAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAA 1192203 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | ||||||||||||||||||| | || || | | | ||| || | ||||| || Sbjct 1192204 CAGAGATTAATTTTTGCTGGTAAGCAGTTGGAAGACGGTAGAACCTTATCCGACTACAAC 1192263 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||||||||| ||||| | || | |||||| Sbjct 1192264 ATCCAAAAGGAGTCCACCTTGCACTTGGTCTTG 1192296 Score = 131 bits (144), Expect = 2e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||| | || || ||||| || ||| | ||||||||||| | Sbjct 1191628 ATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATCACTTTGGAGGTTGAGTCCTCT 1191687 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| | || || ||||||||||| || ||||| ||||||||| Sbjct 1191688 GACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAG 1191747 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || || |||||||||||| | || || | | | ||| || | ||||| || Sbjct 1191748 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCCGACTACAAC 1191807 Query 27586 GTCCAAAAGGAATCCAC 27602 |||||||||| ||||| Sbjct 1191808 ATCCAAAAGGAGTCCAC 1191824 Score = 122 bits (134), Expect = 1e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | || || |||||||||||| | || || || || | Sbjct 1191856 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACTATTACTTTAGAAGTCGAATCTTCT 1191915 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||| |||| || |||||||||||||| ||||| |||||||| Sbjct 1191916 GACACTATTGACAATGTCAAGTCTAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAA 1191975 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || || |||||||||||| | || || | | | ||| || | || || || Sbjct 1191976 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCCGATTACAAC 1192035 Query 27586 GTCCAAAAGGAATCCAC 27602 | || || |||||||| Sbjct 1192036 ATTCAGAAAGAATCCAC 1192052 >seq11 Length=2453602 Score = 154 bits (170), Expect = 2e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| | || || ||||| ||||| | ||||||||||| | Sbjct 171092 ATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGTCCTCT 171033 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| | || || || ||||||||||| ||||| ||||||||| Sbjct 171032 GACACCATTGATAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAG 170973 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | |||||||||||||||||||| | ||||||| | ||| | | ||||| || Sbjct 170972 CAGAGATTAATTTTTGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTACAAC 170913 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||||||||| |||||| | || |||| ||| Sbjct 170912 ATCCAAAAGGAGTCCACTTTGCACTTAGTTTTG 170880 Score = 150 bits (166), Expect = 2e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | || || ||||| ||||| | ||||||||||| | Sbjct 170636 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGTCCTCT 170577 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| | || || || ||||||||||| || || ||||||||| Sbjct 170576 GACACCATTGATAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAG 170517 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | |||||||||||||||||| | ||||||| | ||| | | ||||| || Sbjct 170516 CAGAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTACAAC 170457 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||||||||| |||||| | || |||| ||| Sbjct 170456 ATCCAAAAGGAGTCCACTTTGCACTTAGTTTTG 170424 Score = 150 bits (166), Expect = 2e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||| || || || ||||| || ||| | ||||||||||| | Sbjct 171320 ATGCAAATTTTCGTTAAGACCCTAACTGGTAAGACCATCACTTTGGAGGTTGAGTCCTCT 171261 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| | || || || ||||||||||| || || ||||||||| Sbjct 171260 GACACCATTGATAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAG 171201 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | |||||||||||||||||| | ||||||| | ||| | | ||||| || Sbjct 171200 CAGAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTACAAC 171141 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||||||||| |||||| | || |||| ||| Sbjct 171140 ATCCAAAAGGAGTCCACTTTGCACTTAGTTTTG 171108 Score = 145 bits (160), Expect = 9e-30 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | || || ||||| ||||| | ||||||||||| | Sbjct 170864 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGTCCTCT 170805 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| | || || || ||||||||||| || || ||||||||| Sbjct 170804 GACACCATTGATAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAG 170745 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | ||||| |||||||||||| | ||||||| | ||| | | ||||| || Sbjct 170744 CAGAGATTGATTTTCGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTACAAC 170685 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||||||||| |||||| | || |||| ||| Sbjct 170684 ATCCAAAAGGAGTCCACTTTGCACTTAGTTTTG 170652 Score = 132 bits (146), Expect = 5e-26 Identities = 298/442 (67%), Gaps = 12/442 (3%) Strand=Plus/Plus Query 81319 AAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG-AC-----CCCTTG 81372 || || | |||||| || ||||||||||||| || | ||||| | || | ||| Sbjct 2098494 AAATCAAAGATGTCGGCGTGCCATGGCTCCAAGTAGAGGGCGAAAGCACCGGGTCTCTT- 2098552 Query 81373 CGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATG 81432 | ||||| |||| || ||||| ||||| ||| || || | | |||||| ||| Sbjct 2098553 --ATTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAACACTCTGACCATAGGAATG 2098610 Query 81433 ATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTG 81492 || |||| ||| |||||| ||||| | || | || | || || | ||| || Sbjct 2098611 ATTCCATTTGAAGTACCGTTAGTACCAGCAATGTAAGCACCAGTCGCACGAATGTTG-TG 2098669 Query 81493 ATTG-AAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTC 81551 | || | ||| |||||||| | | ||||||||| |||||| || | ||| || Sbjct 2098670 AATGTGCAAACCAATGCCACCGGCGCTCTTTGAAATTAAAGCACAGGTTTTTAAGGTATC 2098729 Query 81552 ATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGG 81611 ||||| || || || ||| | ||||| ||| |||||||||| |||||| ||||| Sbjct 2098730 GTAAATACCGTCAATAGAATCCTCCTTCATAGCAACCAAGAAACAGGATGACATTTGAGG 2098789 Query 81612 GCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACAT 81671 | || |||||||||| ||||| | ||||| ||||| | | | ||||| Sbjct 2098790 CAGAGGAGTACCAGCATTGAACAAAGTTGGAGAACCGTGAGTGAAAAATCTTTGCGACAT 2098849 Query 81672 CAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACG 81731 || || ||| |||| || | ||| |||||||||||||| ||||| | || || | Sbjct 2098850 CAAGTTATAACTTTCGAGCACTCTTGGGATATCGTCACCGTGTATACCAACTGCAACTCT 2098909 Query 81732 CATAAACATGTACTG-GGGCGT 81752 ||||| || || || |||||| Sbjct 2098910 CATAATCAAGTGTTGAGGGCGT 2098931 >seq10 Length=3096056 Score = 125 bits (138), Expect = 8e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || | || || |||||||| || | ||||| ||||| Sbjct 917757 ATGCAAATTTTTGTTAAAACCTTGACAGGTAAGACTATCACCTTGGAGGTGGAGTCTTCC 917698 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | || ||||| ||||||||||||||||| || ||||| Sbjct 917697 GACACTATCGACAATGTTAAGTCCAAGATTCAAGACAAGGAGGGAATTCCACCTGACCAA 917638 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | |||||||||||||||||| | ||||||| | || | | ||||||||| Sbjct 917637 CAAAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGCAGAACTTTGTCTGACTATAAT 917578 Query 27586 GTCCAAAAGGAATCCAC 27602 |||||||||| || || Sbjct 917577 ATCCAAAAGGAGTCTAC 917561 >seq16 Length=1434301 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||| | || || |||||||| || | ||||| ||||| Sbjct 508958 ATGCAAATTTTCGTTAAGACCTTGACAGGTAAGACTATCACCTTGGAGGTGGAGTCTTCC 509017 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || || || |||||||||||||| || || ||||| Sbjct 509018 GACACTATCGACAACGTTAAGTCCAAGATCCAAGACAAGGAGGGAATCCCACCTGACCAA 509077 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | |||||||||||||||||| | ||||||| | ||| | | ||||| || Sbjct 509078 CAGAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTACAAC 509137 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||||||||| ||||| | || | |||||| Sbjct 509138 ATCCAAAAGGAGTCCACCTTGCACTTGGTCTTG 509170 >seq15 Length=1667799 Score = 89.7 bits (98), Expect = 6e-13 Identities = 118/161 (73%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007 |||||| ||||| ||||||||||| || || || ||||||| |||||||||||||| Sbjct 1354280 ACTCGATTATTTCGCAACACAAATTAGACGATTTTATAGTACCCAAGTTTTTCTGGTTTG 1354339 Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067 | || || |||| ||||||||| ||| || ||| || ||||| | || || | Sbjct 1354340 ATTTTCGATTACAAGAGTCCTTGTATAGCATATAAGGGCCTCCTGTCTCAATTTGAGATT 1354399 Query 81068 TGAGGATGGCGTCCCAAA-TCTCGCGCGCCTTGACCACCTT 81107 | ||| |||| ||||| |||| | || ||||| ||||| Sbjct 1354400 CTAAGATAGCGTGCCAAAGTCTC-TGTGCTTTGACAACCTT 1354439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310278809040