Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq17 145 7e-30 seq11 118 9e-22 seq16 113 4e-20 seq10 113 4e-20 >seq17 Length=1373282 Score = 145 bits (160), Expect = 7e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| |||| || ||| |||||||| | ||||| ||| | || Sbjct 1191856 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACTATTACTTTAGAAGTCGAATCTTCT 1191915 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || || ||||| || || || ||||| || ||| Sbjct 1191916 GACACTATTGACAATGTCAAGTCTAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAA 1191975 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | ||| || || |||||||||||| || ||| | |||||||||||| Sbjct 1191976 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCCGATTACAAC 1192035 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || || || |||||||| ||||| || | ||| | ||||| || Sbjct 1192036 ATTCAGAAAGAATCCACCTTACACTTGGTCTTAAGATTGAGAGGTGGTAT 1192085 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||| ||| ||||||| | || || || | || Sbjct 1192084 ATGCAGATTTTCGTCAAGACCTTGACCGGTAAGACTATTACCTTGGAGGTTGAGTCCTCT 1192143 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || |||||||| || || || ||||| || ||| Sbjct 1192144 GACACCATTGACAACGTCAAGTCTAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAA 1192203 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | ||||| | || || || || ||||||||| || ||| | ||||| |||||| Sbjct 1192204 CAGAGATTAATTTTTGCTGGTAAGCAGTTGGAAGACGGTAGAACCTTATCCGACTACAAC 1192263 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || ||||||||||| ||||| || ||||| ||| | ||| | ||||| Sbjct 1192264 ATCCAAAAGGAGTCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 1192310 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || | || || ||| | || ||| | || || || | || Sbjct 1191628 ATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATCACTTTGGAGGTTGAGTCCTCT 1191687 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || || ||||| ||||| || ||||| || || Sbjct 1191688 GACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAG 1191747 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | ||| || || |||||||||||| || ||| | ||||| |||||| Sbjct 1191748 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCCGACTACAAC 1191807 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| |||||||| ||||||||| | ||| | ||||| || Sbjct 1191808 ATCCAAAAGGAGTCCACCTTACACTTGGTTTTGAGATTGAGAGGTGGTAT 1191857 >seq11 Length=2453602 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||| |||| || ||| | ||||| | || || || | || Sbjct 171092 ATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGTCCTCT 171033 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || |||||||| || || || ||||| || || Sbjct 171032 GACACCATTGATAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAG 170973 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | ||||| | || || || |||||||| || | ||| | || || |||||| Sbjct 170972 CAGAGATTAATTTTTGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTACAAC 170913 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || || || || |||||| | ||| | ||||| || Sbjct 170912 ATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTGAGAGGTGGTAT 170863 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| |||| || ||| | ||||| | || || || | || Sbjct 170864 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGTCCTCT 170805 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || |||||||| || || || ||||| || || Sbjct 170804 GACACCATTGATAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAG 170745 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | ||| || || |||||||| || | ||| | || || |||||| Sbjct 170744 CAGAGATTGATTTTCGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTACAAC 170685 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || || || || |||||| | ||| | ||||| || Sbjct 170684 ATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTGAGAGGTGGTAT 170635 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| |||| || ||| | ||||| | || || || | || Sbjct 170636 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGTCCTCT 170577 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || |||||||| || || || ||||| || || Sbjct 170576 GACACCATTGATAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAG 170517 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || |||||||| || | ||| | || || |||||| Sbjct 170516 CAGAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTACAAC 170457 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || ||||||||||| || || || || |||||| | || | ||||| Sbjct 170456 ATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTAAGAGGTGG 170410 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || || || ||| | || ||| | || || || | || Sbjct 171320 ATGCAAATTTTCGTTAAGACCCTAACTGGTAAGACCATCACTTTGGAGGTTGAGTCCTCT 171261 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || |||||||| || || || ||||| || || Sbjct 171260 GACACCATTGATAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAG 171201 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || |||||||| || | ||| | || || |||||| Sbjct 171200 CAGAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTACAAC 171141 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || || || || |||||| | ||| | ||||| || Sbjct 171140 ATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTGAGAGGTGGTAT 171091 >seq16 Length=1434301 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || |||| || ||| |||| || | || ||||| | ||| Sbjct 508958 ATGCAAATTTTCGTTAAGACCTTGACAGGTAAGACTATCACCTTGGAGGTGGAGTCTTCC 509017 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || |||||||| || || || ||||| || ||| Sbjct 509018 GACACTATCGACAACGTTAAGTCCAAGATCCAAGACAAGGAGGGAATCCCACCTGACCAA 509077 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || |||||||| || | ||| | || || |||||| Sbjct 509078 CAGAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTACAAC 509137 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || ||||||||||| ||||| || ||||| ||| | ||| | ||||| Sbjct 509138 ATCCAAAAGGAGTCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 509184 >seq10 Length=3096056 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| |||| || ||| |||| || | || ||||| | ||| Sbjct 917757 ATGCAAATTTTTGTTAAAACCTTGACAGGTAAGACTATCACCTTGGAGGTGGAGTCTTCC 917698 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || ||||||||||| || || || ||||| || ||| Sbjct 917697 GACACTATCGACAATGTTAAGTCCAAGATTCAAGACAAGGAGGGAATTCCACCTGACCAA 917638 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || || |||||||| || | || | || || || || Sbjct 917637 CAAAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGCAGAACTTTGTCTGACTATAAT 917578 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || ||||||||||| ||||| || ||||||||| | ||| | ||||| Sbjct 917577 ATCCAAAAGGAGTCTACCTTGCACTTGGTTTTGAGATTGAGAGGTGG 917531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918307579840