Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq11 98.7 7e-16 seq17 89.7 4e-13 >seq11 Length=2453602 Score = 98.7 bits (108), Expect = 7e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || ||| |||| || ||||| | ||||||||||| || || |||||||| Sbjct 170999 GACAAGGAGGGTATTCCACCAGACCAGCAGAGATTAATTTTTGCTGGTAAGCAATTGGAG 170940 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | | | | |||||| || |||||||||||||| ||| ||||||||| || |||||| Sbjct 170939 GATGGAAGAACCTTGTCTGACTACAACATCCAAAAGGAGTCCACTTTGCACTTAGTTTTG 170880 Query 28003 CGTTTGCGTGGCGG 28016 | ||| | || || Sbjct 170879 AGATTGAGAGGTGG 170866 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || ||| | || || ||||| | || |||||||| || || |||||||| Sbjct 171227 GACAAGGAGGGTATCCCACCAGACCAGCAGAGATTGATTTTTGCTGGTAAGCAATTGGAG 171168 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | | | | |||||| || |||||||||||||| ||| ||||||||| || |||||| Sbjct 171167 GATGGAAGAACCTTGTCTGACTACAACATCCAAAAGGAGTCCACTTTGCACTTAGTTTTG 171108 Query 28003 CGTTTGCGTGGCGG 28016 | ||| | || || Sbjct 171107 AGATTGAGAGGTGG 171094 Score = 86.0 bits (94), Expect = 4e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || ||| | || || ||||| | || |||||||| || || |||||||| Sbjct 170543 GACAAGGAGGGTATCCCACCAGACCAGCAGAGATTGATTTTTGCTGGTAAGCAATTGGAG 170484 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | | | | |||||| || |||||||||||||| ||| ||||||||| || |||||| Sbjct 170483 GATGGAAGAACCTTGTCTGACTACAACATCCAAAAGGAGTCCACTTTGCACTTAGTTTTG 170424 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || ||| | || || ||||| | || ||||| || || || |||||||| Sbjct 170771 GACAAGGAGGGTATCCCACCAGACCAGCAGAGATTGATTTTCGCTGGTAAGCAATTGGAG 170712 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | | | | |||||| || |||||||||||||| ||| ||||||||| || |||||| Sbjct 170711 GATGGAAGAACCTTGTCTGACTACAACATCCAAAAGGAGTCCACTTTGCACTTAGTTTTG 170652 Query 28003 CGTTTGCGTGGCGG 28016 | ||| | || || Sbjct 170651 AGATTGAGAGGTGG 170638 >seq17 Length=1373282 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| |||||| |||| || |||||| | || || || || || || |||||||| Sbjct 1191721 GACAAGGAAGGTATTCCACCAGACCAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAA 1191780 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||| | | ||| ||||| |||||||||||||| ||| ||| || || ||||||||| Sbjct 1191781 GACGGTAGAACCTTATCCGACTACAACATCCAAAAGGAGTCCACCTTACACTTGGTTTTG 1191840 Query 28003 CGTTTGCGTGGCGG 28016 | ||| | || || Sbjct 1191841 AGATTGAGAGGTGG 1191854 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || ||| |||| || || || | ||||||||||| || || || ||||| Sbjct 1192177 GACAAGGAGGGTATTCCACCAGACCAACAGAGATTAATTTTTGCTGGTAAGCAGTTGGAA 1192236 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||| | | ||| ||||| |||||||||||||| ||| ||| ||||| ||||| ||| Sbjct 1192237 GACGGTAGAACCTTATCCGACTACAACATCCAAAAGGAGTCCACCTTGCACTTGGTCTTG 1192296 Query 28003 CGTTTGCGTGGCGG 28016 | ||| | || || Sbjct 1192297 AGATTGAGAGGTGG 1192310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355862326269759