Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq17 129 4e-25 seq11 123 2e-23 seq16 89.7 3e-13 >seq17 Length=1373282 Score = 129 bits (142), Expect = 4e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 23607 TAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTC 23666 ||| ||||| ||||||||||| ||| | || || || || |||||| | || ||||| || Sbjct 1191624 TAAGATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATCACTTTGGAGGTTGAGTC 1191683 Query 23667 CACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | | ||||| |||| | | || || || ||||| |||||| | || ||||| Sbjct 1191684 CTCTGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGTATTCCACCAGA 1191743 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || || | || || || || || || ||| ||||||||| | || ||| ||| || Sbjct 1191744 CCAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCCGACTA 1191803 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||||| ||||| |||||||| ||||| || ||||| || ||| |||| || Sbjct 1191804 CAACATCCAAAAGGAGTCCACCTTACACTTGGTTTTGAGATTGAGAGGTGG 1191854 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| || || | || || || || || ||| | ||||| || || | Sbjct 1191856 ATGCAAATTTTCGTCAAGACTTTGACAGGTAAGACTATTACTTTAGAAGTCGAATCTTCT 1191915 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| ||| | || | || | | ||||| || ||| | || ||||| || Sbjct 1191916 GACACTATTGACAATGTCAAGTCTAAGA-TCCAGGACAAGGAGGGTATTCCACCAGACCA 1191974 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || || || || ||| ||||||||| | || ||| ||||||||| Sbjct 1191975 ACAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCCGATTACAA 1192034 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || ||||| ||||| ||||| || || ||||| ||| |||| || Sbjct 1192035 CATTCAGAAAGAATCCACCTTACACTTGGTCTTAAGATTGAGAGGTGG 1192082 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||| | || || || || || || | || ||||| ||| | Sbjct 1192084 ATGCAGATTTTCGTCAAGACCTTGACCGGTAAGACTATTACCTTGGAGGTTGAGTCCTCT 1192143 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||| || ||| | || ||||| ||| Sbjct 1192144 GACACCATTGACAACGTCAAGTCTAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAA 1192203 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | ||||| ||||| || || || ||||||||| | || ||| ||| |||||| Sbjct 1192204 CAGAGATTAATTTTTGCTGGTAAGCAGTTGGAAGACGGTAGAACCTTATCCGACTACAAC 1192263 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||| |||||||| || || || || || || ||| |||| || Sbjct 1192264 ATCCAAAAGGAGTCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 1192310 >seq11 Length=2453602 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 23607 TAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTC 23666 ||| ||||| ||||||||||| ||||| || || || || |||||| | || ||||| || Sbjct 171324 TAAGATGCAAATTTTCGTTAAGACCCTAACTGGTAAGACCATCACTTTGGAGGTTGAGTC 171265 Query 23667 CACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | | ||||| |||| | | || || || ||||| || ||| | || ||||| Sbjct 171264 CTCTGACACCATTGATAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCAGA 171205 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||| | || || ||||| || || ||| |||| || | | | || || || || Sbjct 171204 CCAGCAGAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTA 171145 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||||| ||||| |||||||| || || |||||||| || ||| |||| || Sbjct 171144 CAACATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTGAGAGGTGG 171094 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || | || || || || || || | || ||||| ||| | Sbjct 171092 ATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGTCCTCT 171033 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||| || ||| | || ||||| || Sbjct 171032 GACACCATTGATAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAG 170973 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | ||||| ||||| || || ||| |||| || | | | || || || |||||| Sbjct 170972 CAGAGATTAATTTTTGCTGGTAAGCAATTGGAGGATGGAAGAACCTTGTCTGACTACAAC 170913 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||| |||||||| || || |||||||| || ||| |||| || Sbjct 170912 ATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTGAGAGGTGG 170866 >seq16 Length=1434301 Score = 89.7 bits (98), Expect = 3e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||| ||||||||||| ||| | || || || || ||||| | || || || || Sbjct 508955 AAGATGCAAATTTTCGTTAAGACCTTGACAGGTAAGACTATCACCTTGGAGGTGGAGTCT 509014 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | |||||| | || || |||| | || || ||||| || || | || || || Sbjct 509015 TCCGACACTATCGACAACGTTAAGTC-CAAGATCCAAGACAAGGAGGGAATCCCACCTGA 509073 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 |||||| | || || ||||| || || ||| |||| || | | || || || || Sbjct 509074 CCAACAGAGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTA 509133 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||||| ||||| |||||||| || || || || || || ||| |||| || Sbjct 509134 CAACATCCAAAAGGAGTCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 509184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009529968636