Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq17 159 8e-34 seq10 143 6e-29 seq11 141 2e-28 seq16 138 3e-27 >seq17 Length=1373282 Score = 159 bits (176), Expect = 8e-34 Identities = 165/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| | ||| | ||| | ||||||||||| || | |||||||||| || ||||| || Sbjct 1192071 TCTTAAGACCAAGTGTAAGGTGGATTCTTTCTGAATGTTGTAATCGGATAAGGTTCTACC 1192012 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||| | ||||| ||||||||||| | || ||||||||| || |||||||| ||||| Sbjct 1192011 GTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCTGGTGGAATACCCTCCTT 1191952 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||| |||||||| ||| ||| || || ||||| || | ||| || ||||| || || Sbjct 1191951 GTCCTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGACTTCTAAAGTAAT 1191892 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || |||||||| || | ||| | |||||| Sbjct 1191891 AGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 1191856 Score = 150 bits (166), Expect = 4e-31 Identities = 166/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | ||| | ||||| || ||||||| ||||| |||| || ||||| || Sbjct 1191843 TCTCAAAACCAAGTGTAAGGTGGACTCCTTTTGGATGTTGTAGTCGGATAAGGTTCTACC 1191784 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||| | ||||| ||||||||||| | || ||| ||||| || |||||||||||||| Sbjct 1191783 GTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTT 1191724 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||| |||||||| ||| || || |||||||| |||| || || || || ||||| Sbjct 1191723 GTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCAACCTCCAAAGTGAT 1191664 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTAT 225718 ||||| || || || || || | ||| | |||||| |||| Sbjct 1191663 GGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCATCTTAT 1191623 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | ||| | ||||| || ||||||| ||||| |||| || ||||| || Sbjct 1192299 TCTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCGGATAAGGTTCTACC 1192240 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||| | |||||| ||||| || || | || |||||||| || |||||||| ||||| Sbjct 1192239 GTCTTCCAACTGCTTACCAGCAAAAATTAATCTCTGTTGGTCTGGTGGAATACCCTCCTT 1192180 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||||||| ||| || || |||||||| |||| || || || || || || Sbjct 1192179 GTCTTGGATCTTAGACTTGACGTTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAAT 1192120 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || ||||| || || | ||| | ||||| Sbjct 1192119 AGTCTTACCGGTCAAGGTCTTGACGAAAATCTGCAT 1192084 >seq10 Length=3096056 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | ||| | || || || ||||||| ||| || || | ||||||||| || Sbjct 917542 TCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATATTATAGTCAGACAAAGTTCTGCC 917601 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| || | ||||| ||||| || || | || ||||||||| || ||||| || ||||| Sbjct 917602 ATCCTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATTCCCTCCTT 917661 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| ||||| ||| ||| ||||| ||||| || | ||||| || || ||||| Sbjct 917662 GTCTTGAATCTTGGACTTAACATTGTCGATAGTGTCGGAAGACTCCACCTCCAAGGTGAT 917721 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| || ||||| ||||| | || | |||||| || Sbjct 917722 AGTCTTACCTGTCAAGGTTTTAACAAAAATTTGCATCTT 917760 >seq11 Length=2453602 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | ||| | |||||| || ||||||| ||||| || | ||| ||||| || Sbjct 170649 TCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCC 170708 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| || | ||||| |||||||| || | || || ||||| || || ||||| ||||| Sbjct 170709 ATCCTCCAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGGATACCCTCCTT 170768 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||||||| ||| || || |||||||| |||| || || || || || || Sbjct 170769 GTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACCTCCAAGGTAAT 170828 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || |||||||| || | ||| | |||||| Sbjct 170829 TGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 170864 Score = 138 bits (152), Expect = 3e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | ||| | |||||| || ||||||| ||||| || | ||| ||||| || Sbjct 170421 TCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCC 170480 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| || | ||||| ||||| || || | || || ||||| || || ||||| ||||| Sbjct 170481 ATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGTGGGATACCCTCCTT 170540 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||||||| ||| || || |||||||| |||| || || || || || || Sbjct 170541 GTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACCTCCAAGGTAAT 170600 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || |||||||| || | ||| | |||||| Sbjct 170601 TGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 170636 Score = 138 bits (152), Expect = 3e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | ||| | |||||| || ||||||| ||||| || | ||| ||||| || Sbjct 170877 TCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCC 170936 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| || | ||||| ||||| || || | || || ||||| || |||||||| ||||| Sbjct 170937 ATCCTCCAATTGCTTACCAGCAAAAATTAATCTCTGCTGGTCTGGTGGAATACCCTCCTT 170996 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||||||| ||| || || |||||||| |||| || || || || || || Sbjct 170997 GTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACCTCCAAGGTAAT 171056 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || |||||||| || | ||| | ||||| Sbjct 171057 TGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 171092 Score = 132 bits (146), Expect = 1e-25 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | ||| | |||||| || ||||||| ||||| || | ||| ||||| || Sbjct 171105 TCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCC 171164 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| || | ||||| ||||| || || | || || ||||| || || ||||| ||||| Sbjct 171165 ATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGTGGGATACCCTCCTT 171224 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||||||| ||| || || |||||||| |||| || || || || ||||| Sbjct 171225 GTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAACCTCCAAAGTGAT 171284 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTAT 225718 ||||| || || | || || | ||| | |||||| |||| Sbjct 171285 GGTCTTACCAGTTAGGGTCTTAACGAAAATTTGCATCTTAT 171325 >seq16 Length=1434301 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | ||| | ||||| || ||||||| ||||| || | ||| ||||| || Sbjct 509173 TCTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTGCC 509114 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| || | ||||| ||||| || || | || |||||||| || || || || ||||| Sbjct 509113 ATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGTTGGTCAGGTGGGATTCCCTCCTT 509054 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||||||| ||| || ||||| ||||| || | ||||| || || ||||| Sbjct 509053 GTCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCGGAAGACTCCACCTCCAAGGTGAT 508994 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| || ||||| || || | ||| | |||||| || Sbjct 508993 AGTCTTACCTGTCAAGGTCTTAACGAAAATTTGCATCTT 508955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530940251798