Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq17 95.1 3e-14 seq11 91.5 3e-13 >seq17 Length=1373282 Score = 95.1 bits (104), Expect = 3e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || || ||||| || ||||||||||||| ||| ||||| || ||||| | || || Sbjct 1192052 GTGGATTCTTTCTGAATGTTGTAATCGGATAAGGTTCTACCGTCTTCCAATTGCTTACCA 1191993 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 |||||||| | || || ||||| | | || || ||||| || || || || ||| Sbjct 1191992 GCGAAGATCAATCTTTGTTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTAGACTTG 1191933 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 ||| | || | |||| ||| || ||||| | ||||||||| || || || | |||| Sbjct 1191932 ACATTGTCAATAGTGTCAGAAGATTCGACTTCTAAAGTAATAGTCTTACCTGTCAAAGTC 1191873 Query 152088 TTCACGAAGACCTGCAT 152104 || ||||| | ||||| Sbjct 1191872 TTGACGAAAATTTGCAT 1191856 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || ||||| |||||||||||||| |||| ||| ||||| || ||||| | || || Sbjct 1191824 GTGGACTCCTTTTGGATGTTGTAGTCGGATAAGGTTCTACCGTCTTCCAATTGCTTACCA 1191765 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 |||||||| | || |||||||| | | || |||||||| || || || || ||| Sbjct 1191764 GCGAAGATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCCTGGATCTTGGACTTG 1191705 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 || | || | | |||| || ||| || || | ||| || || || || || | ||| Sbjct 1191704 ACGTTGTCAATGGTGTCAGAGGACTCAACCTCCAAAGTGATGGTCTTACCAGTTAAGGTC 1191645 Query 152088 TTCACGAAGACCTGCATTTTA 152108 || ||||| | ||||| ||| Sbjct 1191644 TTAACGAAAATTTGCATCTTA 1191624 Score = 89.7 bits (98), Expect = 1e-12 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || ||||| |||||||||||||| |||| ||| ||||| || ||||| | || || Sbjct 1192280 GTGGACTCCTTTTGGATGTTGTAGTCGGATAAGGTTCTACCGTCTTCCAACTGCTTACCA 1192221 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 || || || | ||||| ||||| | | || || ||||| ||||| || || ||| Sbjct 1192220 GCAAAAATTAATCTCTGTTGGTCTGGTGGAATACCCTCCTTGTCTTGGATCTTAGACTTG 1192161 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 || | || | | |||| || ||| || || | |||||||| || || || | ||| Sbjct 1192160 ACGTTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATAGTCTTACCGGTCAAGGTC 1192101 Query 152088 TTCACGAAGACCTGCAT 152104 || ||||| | |||||| Sbjct 1192100 TTGACGAAAATCTGCAT 1192084 >seq11 Length=2453602 Score = 91.5 bits (100), Expect = 3e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCC 151966 ||| ||||| |||||||||||||| || | || ||||| ||||| || | || || Sbjct 170667 AGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCCATCCTCCAATTGCTTACC 170726 Query 151967 GGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTT 152026 ||||| || | ||||||||||| | | ||| || ||||| ||||| || || || Sbjct 170727 AGCGAAAATCAATCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGGATCTTGGACTT 170786 Query 152027 GACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGT 152086 ||| | || | | |||| || ||| || || | ||||| || || || || | ||| Sbjct 170787 GACGTTATCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATTGTCTTACCAGTCAAAGT 170846 Query 152087 CTTCACGAAGACCTGCAT 152104 ||| ||||| | ||||| Sbjct 170847 CTTGACGAAAATTTGCAT 170864 Score = 89.7 bits (98), Expect = 1e-12 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCC 151966 ||| ||||| |||||||||||||| || | || ||||| ||||| || | || || Sbjct 171123 AGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCCATCCTCCAATTGCTTACC 171182 Query 151967 GGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTT 152026 || || || | ||||||||||| | | ||| || ||||| ||||| || || || Sbjct 171183 AGCAAAAATCAATCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGGATCTTGGACTT 171242 Query 152027 GACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGT 152086 ||| | || | | |||| || ||| || || | ||| || || || || || || || Sbjct 171243 GACGTTATCAATGGTGTCAGAGGACTCAACCTCCAAAGTGATGGTCTTACCAGTTAGGGT 171302 Query 152087 CTTCACGAAGACCTGCATTTTA 152108 ||| ||||| | ||||| ||| Sbjct 171303 CTTAACGAAAATTTGCATCTTA 171324 Score = 87.8 bits (96), Expect = 4e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCC 151966 ||| ||||| |||||||||||||| || | || ||||| ||||| || | || || Sbjct 170439 AGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCCATCCTCCAATTGCTTACC 170498 Query 151967 GGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTT 152026 || || || | ||||||||||| | | ||| || ||||| ||||| || || || Sbjct 170499 AGCAAAAATCAATCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGGATCTTGGACTT 170558 Query 152027 GACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGT 152086 ||| | || | | |||| || ||| || || | ||||| || || || || | ||| Sbjct 170559 GACGTTATCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATTGTCTTACCAGTCAAAGT 170618 Query 152087 CTTCACGAAGACCTGCAT 152104 ||| ||||| | ||||| Sbjct 170619 CTTGACGAAAATTTGCAT 170636 Score = 87.8 bits (96), Expect = 4e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCC 151966 ||| ||||| |||||||||||||| || | || ||||| ||||| || | || || Sbjct 170895 AGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCCATCCTCCAATTGCTTACC 170954 Query 151967 GGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTT 152026 || || || | ||||||||||| | | || || ||||| ||||| || || || Sbjct 170955 AGCAAAAATTAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCTTGGATCTTGGACTT 171014 Query 152027 GACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGT 152086 ||| | || | | |||| || ||| || || | ||||| || || || || | ||| Sbjct 171015 GACGTTATCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATTGTCTTACCAGTCAAAGT 171074 Query 152087 CTTCACGAAGACCTGCAT 152104 ||| ||||| | |||||| Sbjct 171075 CTTGACGAAAATCTGCAT 171092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820548683407