Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq16 170 4e-37 seq17 156 9e-33 seq11 150 4e-31 seq10 147 5e-30 seq3 95.1 3e-14 seq1 93.3 9e-14 >seq16 Length=1434301 Score = 170 bits (188), Expect = 4e-37 Identities = 167/213 (78%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949 |||| || || ||| || ||||||||||||||||||| |||| || | ||||||||| Sbjct 509166 ACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTGCCATCCTC 509108 Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 | ||| || || ||||| ||||| | ||||||||| || || |||||||||||||| Sbjct 509107 CAATTGCTTACCAGCAAAAATCAATCTCTGTTGGTCAGGTGGGATTCCCTCCTTGTCTTG 509048 Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 |||||| | || ||| | ||||||||||| |||| || || || | ||||| ||||| Sbjct 509047 GATCTTGGACTTAACGTTGTCGATAGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTT 508988 Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||| ||||| ||||||||||| || ||||| || Sbjct 508987 ACCTGTCAAGGTCTTAACGAAAATTTGCATCTT 508955 >seq17 Length=1373282 Score = 156 bits (172), Expect = 9e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||||| ||| |||||| || |||||||| || | | || | || || || Sbjct 1192064 ACCAAGTGTAAGGTGGATTCTTTCTGAATGTTGTAATCGGATAAGGTTCTACCGTCTTCC 1192005 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || || |||||||| | ||||||||| ||||||||||||||||| ||| Sbjct 1192004 AATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCTGGTGGAATACCCTCCTTGTCCTGG 1191945 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | || || | || |||||||| |||| ||||||||| | ||| || |||||| Sbjct 1191944 ATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGACTTCTAAAGTAATAGTCTTA 1191885 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||||||||| ||||| || ||||| Sbjct 1191884 CCTGTCAAAGTCTTGACGAAAATTTGCAT 1191856 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||||| ||| || ||||||||||||||||| | | || | || || || Sbjct 1191836 ACCAAGTGTAAGGTGGACTCCTTTTGGATGTTGTAGTCGGATAAGGTTCTACCGTCTTCC 1191777 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || || |||||||| | ||| ||||| |||||||| |||||||| ||| Sbjct 1191776 AATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCCTGG 1191717 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | || ||| | || || ||||| || | || || || | |||||| |||||| Sbjct 1191716 ATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCAACCTCCAAAGTGATGGTCTTA 1191657 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || || ||||||||||| || ||||| || Sbjct 1191656 CCAGTTAAGGTCTTAACGAAAATTTGCATCTT 1191625 Score = 125 bits (138), Expect = 1e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| || || ||| || ||||||||||||||||| | | || | || || || Sbjct 1192292 ACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCGGATAAGGTTCTACCGTCTTCC 1192233 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | || || || ||||| || || | |||||||| ||||||||||||||||||||| Sbjct 1192232 AACTGCTTACCAGCAAAAATTAATCTCTGTTGGTCTGGTGGAATACCCTCCTTGTCTTGG 1192173 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | || ||| | || || ||||| || | || || || | || || |||||| Sbjct 1192172 ATCTTAGACTTGACGTTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATAGTCTTA 1192113 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| ||||| ||||| |||||||| Sbjct 1192112 CCGGTCAAGGTCTTGACGAAAATCTGCAT 1192084 >seq11 Length=2453602 Score = 150 bits (166), Expect = 4e-31 Identities = 150/192 (78%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 || ||||||||||||||||||| |||| || | |||||||| | ||| || || ||||| Sbjct 170902 TCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTTCCATCCTCCAATTGCTTACCAGCAAA 170960 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 || || | || ||||| |||||||||||||||||||||||||| | || ||| | Sbjct 170961 AATTAATCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCTTGGATCTTGGACTTGACGTT 171020 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||| || ||||| || | || || || | || || |||||||| ||||||||||| || Sbjct 171021 ATCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGAC 171080 Query 283088 GAATATCTGCAT 283099 ||| |||||||| Sbjct 171081 GAAAATCTGCAT 171092 Score = 147 bits (162), Expect = 5e-30 Identities = 151/195 (77%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 || ||||||||||||||||||| |||| || | |||||||| | ||| || || ||||| Sbjct 171130 TCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTTCCATCCTCCAATTGCTTACCAGCAAA 171188 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | || ||||| || ||||||||||||||||||||||| | || ||| | Sbjct 171189 AATCAATCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGGATCTTGGACTTGACGTT 171248 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||| || ||||| || | || || || | |||||| |||||||| || | |||||||| Sbjct 171249 ATCAATGGTGTCAGAGGACTCAACCTCCAAAGTGATGGTCTTACCAGTTAGGGTCTTAAC 171308 Query 283088 GAATATCTGCATTTT 283102 ||| || ||||| || Sbjct 171309 GAAAATTTGCATCTT 171323 Score = 145 bits (160), Expect = 2e-29 Identities = 149/192 (78%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 || ||||||||||||||||||| |||| || | |||||||| | ||| || || ||||| Sbjct 170446 TCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTTCCATCCTCCAATTGCTTACCAGCAAA 170504 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | || ||||| || ||||||||||||||||||||||| | || ||| | Sbjct 170505 AATCAATCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGGATCTTGGACTTGACGTT 170564 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||| || ||||| || | || || || | || || |||||||| ||||||||||| || Sbjct 170565 ATCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGAC 170624 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 170625 GAAAATTTGCAT 170636 Score = 141 bits (156), Expect = 2e-28 Identities = 148/192 (77%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 || ||||||||||||||||||| |||| || | |||||||| | ||| || || || || Sbjct 170674 TCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTTCCATCCTCCAATTGCTTACCAGCGAA 170732 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | || ||||| || ||||||||||||||||||||||| | || ||| | Sbjct 170733 AATCAATCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGGATCTTGGACTTGACGTT 170792 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||| || ||||| || | || || || | || || |||||||| ||||||||||| || Sbjct 170793 ATCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGAC 170852 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 170853 GAAAATTTGCAT 170864 >seq10 Length=3096056 Score = 147 bits (162), Expect = 5e-30 Identities = 149/194 (77%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || |||||||| || ||||||| | || | ||||||||| | ||| || || ||||| Sbjct 917567 TCCTTTTGGATATTATAGTCAGACAAAGTTCTGCCATCCTCCAATTGCTTACCAGCAAAA 917626 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | |||||||||| ||||| |||||||||||||| ||||| | || || | Sbjct 917627 ATCAATCTTTGTTGGTCAGGTGGAATTCCCTCCTTGTCTTGAATCTTGGACTTAACATTG 917686 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||||||||| |||| || || || | ||||| |||||||| ||||| || ||||| Sbjct 917687 TCGATAGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTTACCTGTCAAGGTTTTAACA 917746 Query 283089 AATATCTGCATTTT 283102 || || ||||| || Sbjct 917747 AAAATTTGCATCTT 917760 >seq3 Length=1039617 Score = 95.1 bits (104), Expect = 3e-14 Identities = 129/179 (72%), Gaps = 6/179 (3%) Strand=Plus/Plus Query 317026 GTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCA 317085 || ||||| ||||| | ||||||||| |||| || ||||||| || ||||| |||||| Sbjct 88282 GTTGGGAAACCTTCAACCTGACCGTTAGCAATGGCTCTCATCAAGGTGGACTTACCAGCA 88341 Query 317086 CCATTGGGGCCGCAAAGACCATACCGA---TTTCCCTTCTTCAGATTAAAACGGGTGTTG 317142 || || || ||||| | ||| || | |||| |||||| | || | || || Sbjct 88342 CCGTTTGGACCGCACAAACCGTATCTTCTGTTTC---TCTTCAATCTGAATTGAGTTCTG 88398 Query 317143 TTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 |||| | ||||| |||| || |||| |||||||||||| | ||||| ||| || || Sbjct 88399 TTCAACAAGATCTTGGCACCGTAAGCCAAAGAGAACTCACAGTTACACAAGTCTTCACC 88457 >seq1 Length=3185900 Score = 93.3 bits (102), Expect = 9e-14 Identities = 189/277 (68%), Gaps = 8/277 (3%) Strand=Plus/Plus Query 316929 AACTTGGTCGTCATTGGCAATGAAGTCAACGATAGACGTGTTAGATTCGGATCCGTCGAG 316988 ||||| |||| | | || ||||||||||| ||| || | || | | || || | Sbjct 1543565 AACTTCACCGTCTTCGATAACGAAGTCAACGACAGAAGTCTCAGCATGAGTACCATCAAT 1543624 Query 316989 GTCATGCTCAACATATGCAGTTTTCAGAATA-TCCTTCGTCGGGAACCCTTCCAACTGAC 317047 || ||||| || || | || || | | | |||| || ||||| || || | |||| Sbjct 1543625 ATCGTGCTCGACGTAAACGGTCTT-ACATTCCTCCTGAGTTGGGAAACCCTCGACTTGAC 1543683 Query 317048 CGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCAT 317107 |||| |||| || ||||||| || ||||| || ||||| || || || || | ||| | Sbjct 1543684 CGTTAGCAATAGCTCTCATCAAGGTGGACTTACCGGCACCGTTTGGACCACACAAACCGT 1543743 Query 317108 ACCGA---TTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCAT 317164 | | |||| |||||| | || | || |||||| | |||||| |||| | Sbjct 1543744 ATCTTCTGTTTC---TCTTCAATCTGAATTGAGTTCTGTTCAACAAGATCTTAGCACCGT 1543800 Query 317165 ATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 | |||| |||||||||||| | ||||| |||||| || Sbjct 1543801 AAGCCAAAGAGAACTCACAGTTACACAAGTCCTCACC 1543837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738972007118