Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq17 136 3e-27 seq11 123 2e-23 seq16 114 9e-21 seq10 82.4 5e-11 >seq17 Length=1373282 Score = 136 bits (150), Expect = 3e-27 Identities = 173/236 (73%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| |||||| |||| ||| | ||| |||||||||||||||||| Sbjct 1191861 TTGCATACCACCTCTCAATCTCAAAACCAAGTGTAAGGTGGACTCCTTTTGGATGTTGTA 1191802 Query 44164 ATCGGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 |||| | ||| | |||| |||| ||||| || || |||||||| | ||||| Sbjct 1191801 GTCGGATAAGGTT--CTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGG 1191744 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281 |||| || | ||||||||| ||| ||||| ||| | | | |||||||| | | Sbjct 1191743 TCTGGTGGAATACCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAG 1191684 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||||| || || ||||| || || | |||||| ||||| |||||||| Sbjct 1191683 GACTCAACCTCCAAAGTGATGGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCAT 1191628 Score = 123 bits (136), Expect = 2e-23 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| |||||| |||| ||| | ||| |||||||||||||||||| |||| Sbjct 1192310 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCGGAT 1192251 Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | ||| | |||| |||| |||||| || ||||| || || | ||| || |||| | Sbjct 1192250 AAGGTT--CTACCGTCTTCCAACTGCTTACCAGCAAAAATTAATCTCTGTTGGTCTGGTG 1192193 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCA 44288 | | ||| ||||| || ||||| ||| | | | |||||||| | ||| || | Sbjct 1192192 GAATACCCTCCTTGTCTTGGATCTTAGACTTGACGTTGTCAATGGTGTCAGAGGACTCAA 1192133 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| ||||| ||||| || || | |||||| ||||| || ||||| Sbjct 1192132 CCTCCAAGGTAATAGTCTTACCGGTCAAGGTCTTGACGAAAATCTGCAT 1192084 Score = 98.7 bits (108), Expect = 7e-16 Identities = 165/235 (70%), Gaps = 8/235 (3%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||||| ||| || |||| ||| | ||| || || || ||||||||||| Sbjct 1192086 CATACCACCTCTCAATCTTAAGACCAAGTGTAAGGTGGATTCTTTCTGAATGTTGTAATC 1192027 Query 44167 GGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 || | ||| | |||| |||| ||||| || || |||||||| | || || ||| Sbjct 1192026 GGATAAGGTT--CTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCT 1191969 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGG 44282 | || | ||| ||||| ||| ||||| ||| || ||| | || ||||| | | Sbjct 1191968 GGTGGAATACCCTCCTTGTCCTGGATCTTAGACTTGACATTGT--CAATAGTGTCAGAAG 1191911 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || || | ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 1191910 ATTCGACTTCTAAAGTAATAGTCTTACCTGTCAAAGTCTTGACGAAAATTTGCAT 1191856 >seq11 Length=2453602 Score = 123 bits (136), Expect = 2e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||||| |||||| || | ||| | ||| |||||||||||||||||| || Sbjct 171090 CATACCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTC 171149 Query 44167 -GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | | || | | | || |||| ||||| || ||||| ||||| | |||||| |||| Sbjct 171150 AGACAAGGT-TCTTCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTG 171208 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285 || | ||| ||||| || ||||| ||| | | | |||||||| | ||| | Sbjct 171209 GTGGGATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACT 171268 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||||| || || ||||| || || |||||||| ||||| |||||||| Sbjct 171269 CAACCTCCAAAGTGATGGTCTTACCAGTTAGGGTCTTAACGAAAATTTGCAT 171320 Score = 114 bits (126), Expect = 9e-21 Identities = 168/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| |||||| || | ||| | ||| |||||||||||||||||| Sbjct 170631 TTGCATACCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTA 170690 Query 44164 ATC-GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 || | | || | | | || |||| ||||| || || || ||||| | |||||| | Sbjct 170691 GTCAGACAAGGT-TCTTCCATCCTCCAATTGCTTACCAGCGAAAATCAATCTCTGCTGGT 170749 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282 ||| || | ||| ||||| || ||||| ||| | | | |||||||| | || Sbjct 170750 CTGGTGGGATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGG 170809 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||||| ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 170810 ACTCAACCTCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 170864 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC-GGC 44169 || ||||| | |||||| || | ||| | ||| |||||||||||||||||| || | | Sbjct 170410 CCACCTCTTAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 170469 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 || | | | || |||| ||||| || ||||| ||||| | |||||| |||| || Sbjct 170470 AAGGT-TCTTCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGGTCTGGTGG 170528 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCAC 44289 | ||| ||||| || ||||| ||| | | | |||||||| | ||| || || Sbjct 170529 GATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGGACTCAAC 170588 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 170589 CTCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 170636 Score = 111 bits (122), Expect = 1e-19 Identities = 167/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| |||||| || | ||| | ||| |||||||||||||||||| Sbjct 170859 TTGCATACCACCTCTCAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTGTA 170918 Query 44164 ATC-GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 || | | || | | | || |||| ||||| || ||||| || || | |||||| | Sbjct 170919 GTCAGACAAGGT-TCTTCCATCCTCCAATTGCTTACCAGCAAAAATTAATCTCTGCTGGT 170977 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282 ||| || | ||| ||||| || ||||| ||| | | | |||||||| | || Sbjct 170978 CTGGTGGAATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTATCAATGGTGTCAGAGG 171037 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||||| ||||| ||||| || || | ||||| ||||| || ||||| Sbjct 171038 ACTCAACCTCCAAGGTAATTGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 171092 >seq16 Length=1434301 Score = 114 bits (126), Expect = 9e-21 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC-GGC 44169 || ||||||| |||||| |||| ||| | ||| |||||||||||||||||| || | | Sbjct 509184 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCAGAC 509125 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 || | || | || |||| ||||| || ||||| ||||| | ||| || || | || Sbjct 509124 AAGGTTCTGC-CATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGTTGGTCAGGTGG 509066 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCA 44288 | || ||||| || ||||| ||| || ||| | || ||||||| || |||| Sbjct 509065 GATTCCCTCCTTGTCTTGGATCTTGGACTT-AACGTTGTCGATAGTGTCGGAAGACTCCA 509007 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| || || ||||| || || | |||||| ||||| |||||||| Sbjct 509006 CCTCCAAGGTGATAGTCTTACCTGTCAAGGTCTTAACGAAAATTTGCAT 508958 >seq10 Length=3096056 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC-GGC 44169 || ||||||| |||||| |||| ||| | || |||||||||||| || || || | | Sbjct 917531 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATATTATAGTCAGAC 917590 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 | | || | || |||| ||||| || ||||| ||||| | || || || | || Sbjct 917591 AAAGTTCTGC-CATCCTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGG 917649 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCC 44287 | || ||||| || ||||| ||| || ||| | || ||||||| || ||| Sbjct 917650 AATTCCCTCCTTGTCTTGAATCTTGGACTTAACATTGT--CGATAGTGTCGGAAGACTCC 917707 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| || || ||||| || || | ||| || || || |||||||| Sbjct 917708 ACCTCCAAGGTGATAGTCTTACCTGTCAAGGTTTTAACAAAAATTTGCAT 917757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990325414489