Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Millerozyma_20farinosa_20[genbank_20GCA_5F002196765.1_202017-06-16] 17 sequences; 21,255,474 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq17 129 1e-24 seq11 129 1e-24 seq16 114 3e-20 >seq17 Length=1373282 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || | || || || || ||||| | ||||| || ||| ||| Sbjct 1191631 CAAATTTTCGTTAAGACCTTAACTGGTAAGACCATCACTTTGGAGGTTGAGTCCTCTGAC 1191690 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| |||||||| ||||| || || || ||||||||| Sbjct 1191691 ACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAGCAA 1191750 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || || || | ||||| || || || | |||| || ||| || Sbjct 1191751 AGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCCGACTACAACATC 1191810 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| || || || | || | ||||||||| | ||| Sbjct 1191811 CAAAAGGAGTCCACCTTACACTTGGTTTTGAGATTGAGA 1191849 Score = 107 bits (118), Expect = 5e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || ||| | ||||| || || || || | || || ||| || ||| Sbjct 1191859 CAAATTTTCGTCAAGACTTTGACAGGTAAGACTATTACTTTAGAAGTCGAATCTTCTGAC 1191918 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| ||||| |||||||| || || || || || ||||| ||| Sbjct 1191919 ACTATTGACAATGTCAAGTCTAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAACAA 1191978 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || || || | ||||| || || || | ||||||| ||| | Sbjct 1191979 AGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCCGATTACAACATT 1192038 Query 178104 CAAAAAGAATCAAC 178117 || |||||||| || Sbjct 1192039 CAGAAAGAATCCAC 1192052 >seq11 Length=2453602 Score = 129 bits (142), Expect = 1e-24 Identities = 162/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || ||| | || || || || || ||| | ||||| || ||| ||| Sbjct 170861 CAAATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGTCCTCTGAC 170802 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| || ||||| || || ||||| || |||||||| Sbjct 170801 ACCATTGATAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAGCAG 170742 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | || ||||| || || || | || |||||||| || |||| | || || ||| | Sbjct 170741 AGATTGATTTTCGCTGGTAAGCAATTGGAGGATGGAAGAAC-CTTGTCTGACTACAACAT 170683 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||| || || || |||| | ||||||||| | ||| Sbjct 170682 CCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTGAGA 170643 Score = 123 bits (136), Expect = 6e-23 Identities = 161/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || ||| | || || || || || ||| | ||||| || ||| ||| Sbjct 170633 CAAATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGTCCTCTGAC 170574 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| || ||||| || || ||||| || |||||||| Sbjct 170573 ACCATTGATAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAGCAG 170514 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | || || || || || || | || |||||||| || |||| | || || ||| | Sbjct 170513 AGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGAAGAAC-CTTGTCTGACTACAACAT 170455 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||| || || || |||| | ||||||||| | ||| Sbjct 170454 CCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTAAGA 170415 Score = 123 bits (136), Expect = 6e-23 Identities = 161/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || || || || || || ||||| | ||||| || ||| ||| Sbjct 171317 CAAATTTTCGTTAAGACCCTAACTGGTAAGACCATCACTTTGGAGGTTGAGTCCTCTGAC 171258 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| || ||||| || || ||||| || |||||||| Sbjct 171257 ACCATTGATAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAGCAG 171198 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | || || || || || || | || |||||||| || |||| | || || ||| | Sbjct 171197 AGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGAAGAAC-CTTGTCTGACTACAACAT 171139 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||| || || || |||| | ||||||||| | ||| Sbjct 171138 CCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTGAGA 171099 >seq16 Length=1434301 Score = 114 bits (126), Expect = 3e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || | ||||| || || |||||| | |||||||| || ||| Sbjct 508961 CAAATTTTCGTTAAGACCTTGACAGGTAAGACTATCACCTTGGAGGTGGAGTCTTCCGAC 509020 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||| || ||||| || |||||||| || ||||| || Sbjct 509021 ACTATCGACAACGTTAAGTCCAAGATCCAAGACAAGGAGGGAATCCCACCTGACCAACAG 509080 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | || || || || || || | || ||||| || || |||| | || || ||| | Sbjct 509081 AGATTGATTTTTGCTGGTAAGCAATTGGAGGATGGCAGAAC-CTTGTCTGACTACAACAT 509139 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||| || || || |||| | || |||||| | ||| Sbjct 509140 CCAAAAGGAGTCCACCTTGCACTTGGTCTTGAGATTGAGA 509179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730937812298